Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0893 |
Symbol | |
ID | 1219701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 939530 |
End bp | 940414 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237255 |
Product | transposase |
Protein accession | NP_519014 |
Protein GI | 17545612 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.500999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACTGA AACGTTACGG CTATACCGAG GCCCATCGAC GCGAAGCAGG TCCGCACTAC AGCACAGATC TGACCGATAC CGAATGGGCA CTGGTTGCCG ATTTGTTCGA GCGTCCGGAT GGGGCACGCG GTGCGCCGCC GCGCTACGCG CGTCGGCACC TGGTTGATGC CTGTTGCTAT GTTCTGCGCA CCGGCTGCGC CTGGCGCCTG CTGCCTTTGA GCTTTGCGCC ATGGCAAGCC GTCTACAAGG CCTTCGTGCG CTGGGTTGAA GCCGGGGCCT TCGAACAGAT GCAGGACCGG TTGCGCCGGC AATGGCGCAT GCGCATGGGG CGCAATGCCG AGCCGACTGC TGCGGTCATC GATGCCCAGT CGACGCGCTC TTCGCCGCAG GGCGGAGACA GTGGCTTTGA TGCGGGCAAG AAGATCAAGG GCCGCAAGCG CCACCTAGTG GTAGACACAC TAGGACTGCT GCTGGCCGTC ACGGTGACTG CGGCCAGTGT GCAAGACCGC GATGGCGCTG CACAGGTGGT TGGGCAGGCC TGTGCCAAGG TTCCCACCAT TGAGCGGATC TACACGGATG GAGCTTACGG CGGCAAATGT GCGCAGGCCA TCGAGCAGGT CCATGGGATC CGCGTCGAGG TTGTGCGCAG GCCTGGCAAT CGATCGACGG GGACGCTGCA TGATCCGCAA CAGCCGCTGT GGCCGCAGTT GCAGGCCAGC TTCGTTGTGC TGCCCAAGCG ATGGGTGGTC GAACGCACGC ATGCCTGGAA TGAGCGTTGC CGACGAATGG TCATGCATCA CGACCGAAAG ACCTCGGTCT CCACCGCGTG GGTCTGGCTC GCCGAGGCGT GCATACTTCT CTCCAGGCTC GCCACGACCG GTTGA
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Protein sequence | MTLKRYGYTE AHRREAGPHY STDLTDTEWA LVADLFERPD GARGAPPRYA RRHLVDACCY VLRTGCAWRL LPLSFAPWQA VYKAFVRWVE AGAFEQMQDR LRRQWRMRMG RNAEPTAAVI DAQSTRSSPQ GGDSGFDAGK KIKGRKRHLV VDTLGLLLAV TVTAASVQDR DGAAQVVGQA CAKVPTIERI YTDGAYGGKC AQAIEQVHGI RVEVVRRPGN RSTGTLHDPQ QPLWPQLQAS FVVLPKRWVV ERTHAWNERC RRMVMHHDRK TSVSTAWVWL AEACILLSRL ATTG
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