Gene RSc0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0828 
SymboltISRso14b 
ID1219636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp869969 
End bp870796 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content63% 
IMG OID637237190 
ProductISRSO14-transposase orfB protein 
Protein accessionNP_518949 
Protein GI17545547 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATTC GGCGGAAGGT CAGCATCTCC GAGCGTCGCG CCTGCCGGCT TGTCGGGCTG 
TCCCGCAGCG TGCTGCATTA CGAAGCGCAA ACTGCGCCAG GAAACGAGAT ACTCAAAGCG
CGGCTGGTTG AGCTGGCGCA TGAGCGTCGG CGCTTTGGTT ACCGGCGACT GCACGTTCTG
CTGGAGCGCG AGGGTCTGCA CGCGAATCAC AAACGCGTAC ACCGGTTATA TCGCGAGGCT
GGCTTGGCTG TGCGGCGTCG GCGGCGACGC CACGGCGTGA TGGTCGAGCG CGAGCGACTG
GCTCTGCCGG CCGCGCCGAA CGAGGTCTGG TCGATAGACT TCGTGATGGA CGCGTTGTCC
AATGGGCGTC GCCTGAAGTG CCTGACCATC GTTGATGACT TCACGAAAGA AGCGGTCGAC
ATCGTCGTAG ACCACGGCAT CTCAGGCTTG TATGTGGCAC GAGCGCTGGA CCATGCGGCG
CGCTTCAGGG GCTACCCCAA AGCGCTGCGC ACGGACCAAG GGCCGGAGTT CACGAGCCGA
GCGCTGGACC AGTGGGCATA CGCCAGCGGC GTGTCCCTGA AATTGATTCA GGCTGGCAAA
CCGACGCAGA ATGCCTACAT CGAGTCGTTC AACGGCAAGT TCCGAGACGA ATGCCTGAAT
GAGCACTGGT TCACGAGCCT TGCCCATGCA CGCGCTGTCA TCGCGGCGTG GCGCCAGGAT
TACAACGAGG CGCGGCCGCA CAGCGCCTTG AATTACCAAC CGCCTGCAGA ATTCGCAGCG
CGGTATCGAG CAACAGCGGT GGCTCCTGCC GCTCAGGAGC AAACTTGA
 
Protein sequence
MAIRRKVSIS ERRACRLVGL SRSVLHYEAQ TAPGNEILKA RLVELAHERR RFGYRRLHVL 
LEREGLHANH KRVHRLYREA GLAVRRRRRR HGVMVERERL ALPAAPNEVW SIDFVMDALS
NGRRLKCLTI VDDFTKEAVD IVVDHGISGL YVARALDHAA RFRGYPKALR TDQGPEFTSR
ALDQWAYASG VSLKLIQAGK PTQNAYIESF NGKFRDECLN EHWFTSLAHA RAVIAAWRQD
YNEARPHSAL NYQPPAEFAA RYRATAVAPA AQEQT