| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0821 |
|---|
| Symbol | |
|---|
| ID | 1219629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 863636 |
|---|
| End bp | 864364 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637237183 |
|---|
| Product | putative NADPH nitroreductase protein |
|---|
| Protein accession | NP_518942 |
|---|
| Protein GI | 17545540 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC AAGACACATC CATACTTTGG GGCGCCTTCC AGGCGCTGAA CGGTCGACGC
CGCGCCATAC GCGACTTCGA CGGCATCGCC ATCCCGGACG AGCACGTACG TGAACTCCTG
GCCGAGGCAG CGCGCGCGCC TTCCAGCGGG AATCTCCAGC CGTACCGGTT TCACTGGATT
CGCGACACGA CCCTCAAGGC GCGCGTTGCC GCCGTCTGCA ACGGGCAGCG CGCGGCCGTT
TCGGCATCGA CGCTGATCGT GGTCACGGCC AGTCGGAAAA TCGCGCTCAG CACAGCGGCT
CAGCAACTGG CATATCTCAA CGCATCGACG GACTTGCCTG AGGCATCGAA GGCCTACCAC
CGCAAGCAAA TGCAGATGTT TCTTCGCATC CTGAACGTCG GGTCATGGCC GGTCTGGACG
CCGCTCACCG CGCTTGCCGG ACTCTTCCGG CCCAGCCTCT CTTTGCTTCC AGTGGGGCAC
TTGGGCAACC GGTCCTGGGC GGCTCGCAAC GCCACCTTTG CCGCGCAGAC ACTCATGCTG
GCCGCTGCGG CCAAAGGGGT CGATTCCTGC CCGATGGAGG GCTTCTCGGC TCCGAAGCTG
GTCGAGATCC TGTCCTTGCC GCGGGGGACC GTGATACCGC TGGTCATCGC GCTTGGGTAT
CGATCGCAGA ACGCGAGGAT CGAGCGCCAG TGGCGCAGGT CGTTGACTGA CCTGATCGTG
GAGCATTGA
|
|---|
| Protein sequence | MKTQDTSILW GAFQALNGRR RAIRDFDGIA IPDEHVRELL AEAARAPSSG NLQPYRFHWI
RDTTLKARVA AVCNGQRAAV SASTLIVVTA SRKIALSTAA QQLAYLNAST DLPEASKAYH
RKQMQMFLRI LNVGSWPVWT PLTALAGLFR PSLSLLPVGH LGNRSWAARN ATFAAQTLML
AAAAKGVDSC PMEGFSAPKL VEILSLPRGT VIPLVIALGY RSQNARIERQ WRRSLTDLIV
EH
|
|---|
| |