Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0815 |
Symbol | |
ID | 1219623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 859740 |
End bp | 860138 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637237177 |
Product | hypothetical protein |
Protein accession | NP_518936 |
Protein GI | 17545534 |
COG category | [S] Function unknown |
COG ID | [COG5455] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.591004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAAGA CCAAGATTGT TTCCTGCCTG TTACTCGCGG CCAGCGCGCT GCTGCCGCTT GCCGGCCATG CCCAGGACCG GGGTCGGGGC GATGAGCGTG GCGGGCCCCC CATGGGCCGG GGCCACGGGG ACAGGGATCG CGGTTGGGAC CGCCACCACG GCGACGAGGG CCGTGGCCCG GTCGACATCG ACCGCCGCGC CGATCGTGAC CGTCCGGGCC GCTGGGCCAA GGGCGACCGG ATTCCCCCGG AATACCGCCA GCGCCAATAT ATCGTCGACG ACTGGCGCGC CTACCACCTG GCCCCGCCGC CGCGCGGCTA CCACTGGGTC GGCGTCGGCG GCGACTATTT CCTGGTCGCC CCGACCGGTA TCGTCTTCAA CGTGATGATC GGCGGCTGA
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Protein sequence | MRKTKIVSCL LLAASALLPL AGHAQDRGRG DERGGPPMGR GHGDRDRGWD RHHGDEGRGP VDIDRRADRD RPGRWAKGDR IPPEYRQRQY IVDDWRAYHL APPPRGYHWV GVGGDYFLVA PTGIVFNVMI GG
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