Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0797 |
Symbol | alaS |
ID | 1219605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 841311 |
End bp | 843965 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237159 |
Product | alanyl-tRNA synthetase |
Protein accession | NP_518918 |
Protein GI | 17545516 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCT CCGATATCCG CCAAAAATTC CTGACGTTCT TCGAGACGAA GGGCCACACC GTGGTGCGCT CCTCGCCGCT GGTGCCGGGC AACGATCCGA CGCTGCTGTT CACCAACTCC GGCATGGTGC AGTTCAAGGA CGTCTTCCTC GGCACCGACA AGCGCCCCTA CGTGCGCGCG GCCTCCGTGC AGCGCTGCCT GCGCGCCGGC GGCAAGCACA ACGACCTCGA GAACGTCGGC TACACCGCGC GCCACCACAC CTTCTTCGAG ATGCTGGGCA ACTGGTCGTT CGGCGACTAC TTCAAGCGCG ACGCGCTGGT GTGGGCGTGG GAGCTGCTGA CCCAGGAATA CAAGCTGCCG GCCGACAAGC TGTGGGCCAC CGTCTATCAG ACCGATGACG AGGCCTACGA CATCTGGACC AAGGTCATCG GCCTGCCGCC CGAGCGCGTG GTGCGCATCG GCGACAACAA GGGCGCGCCG TACGCCTCCG ACAACTTCTG GCAGATGGCC GAAACCGGTC CGTGCGGCCC GTGCTCGGAA ATCTTCTACG ACCACGGCCC CGAGATCTGG GGCGGCCCCC CGGGCTCGCC GGAAGCCGAC GGCGACCGCT ACATCGAGAT CTGGAACAAC GTGTTCATGC AGTTCGACCG CCAGCTCGAT CCGCAGACTG GCGAGTACAC GCTGACCCCG CTGCCTGCCC CGTGCGTGGA CACCGGCATG GGCATGGAGC GCCTGGCCGC GATCCTGCAG CACGTGCACA GCAACTACGA GATCGACCTG TTCCAGGCGC TCGTGAGTGC CGCCGCGCGC GAGACCAACA CGAAGGACCT GGCCAACAAC TCGCTGCGCG TGATCGCCGA CCACATCCGC GCCTGCGCGT TCCTGATCGT CGACGGCGTG ATCCCGGGCA ACGAAGGCCG CGGCTACGTG CTGCGCCGGA TCATCCGCCG CGCCATCCGC CACGGCTACA AGCTGGGCTG CCGCGCCGCG TTCTTCCACA AGCTGGTGGA CGATCTCGTC AAGGAAATGG GCGAGGCCTA CCCCGAACTG CGCGAAGCGC GCGACCGCGT GGTCGATGTG CTGCGCACCG AAGAGGCCCG CTTCTTCGAG ACCATCGAGC ACGGCATGTC GATCCTCGAC GGCGCGCTGG GCGAGCTCAA GGCCGCCGGC AAGGATGAGA AACAGCGGAT GCTCGACGGC GAACTCGCCT TCAAGCTGCA CGATACCTAC GGCTTCCCGC TCGACCTCAC GCAGGACGTG TGCCGCGAGA ACGACGTCAT CGTCGACGAG GCCGCCTTCG ACGCCGCCAT GAATCGCCAG CGCGAGCAGG CGCGCGCCGC CGGCAAGTTC AAGATGGCCG CCGGCACGCT CGACTACACC GGCGACAAGA CCACCTTCCA CGGCTACGAC CAGCTGCTGT CCGAGACCTC GCGCGTGACG GCGCTGTTCG TCGATGGGGC TTCGGTGCCG GAGATGCGCC CGGGCCAGAC CGGCGTGGTG GTGCTGGACC ACACGCCGTT CTACGCCGAA TCGGGCGGCC AGGTCGGCGA CCAGGGCACG CTCAAGGCCG CCACGGTCTG GTTTGACGTG GCCGATACGC AGAAGGTGCT GCCGGAGGTG TTCGGCCACC AGGGCACGCT GCGCACCGGC GTGCTGAAGG TCGGCGATGC GGTGGGCGCA GAGGTCGATG CCGTGCGCCG CGCGCGCACC ATGCGCAACC ACTCGGCCAC CCACCTGATG CACAAGGCGC TGCGCGAAGT GCTGGGCGCC CACGTGCAGC AGAAGGGCTC GCTGGTCGAC GCTGACAAGA CCCGCTTCGA TTTCTCGCAC AACACGCCGA TGACGCCGCT GCAGATCCGC GAGGTGGAAG CGCGCGTCAA CGCCGAGATC CTCGCCAACG CGTCCACCAA CGCGCAGATG ATGGGCTTCG ATGATGCGGT CAAGAGCGGC GCCATGGCGC TGTTCGGCGA GAAGTACGGC GACGAGGTGC GCGTGCTGAC GATCGGCTCG TCCAAGGAAC TGTGCGGCGG CACCCACGTG GCGCGCACCG GTGACATCGG CCTGTTCAAG ATCGTCGGCG AGTCCGGCGT GGCCGCCGGC ATCCGCCGCG TGGAGGCCAT CACCGGCGAC AACGTGCTGC ACTACCTGCA GACGCTCGAC ACCCGCATCG GCGAAGCGGC TGCCGCCCTG CGCGCGCAGC CGTCGGAACT GACGCAGCGC ATCGTCCAGG TGCAGGACCA GGTCAAGTCG CTGGAGAAGG AGCTGGAGCG CCTGAAGTCG AAGCTGGCCG CGAGCCAGGG CGATGAACTG GTCAGCCAGG CCGTGGACGT GGCCGGCATC AAGGTGCTGG CCGCCAAGCT CGACGGCGCC GACGCCAAGA CGCTGCGCGA GACCATGGAC AAGCTCAAGG ACAAGCTCAA GACCGCCGCC ATCGTGCTGG GCAGCGTGAG CGACGGCAAG GTCGCGCTGA TCGCCGGCGT GACGGCGGAC GCCACCGCCA GGATCAAGGC GGGCGAACTG GTCAACTTCG TCGCCCAGCA GGTCGGCGGC AAGGGCGGCG GCCGCCCCGA CATGGCCCAG GCCGGCGGCA CCGAGCCCGA CAAGCTGCCG CAGGCGCTGG CTGGTGTGAC GGCGTGGGTG CAGCAGAAGG TGTGA
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Protein sequence | MKASDIRQKF LTFFETKGHT VVRSSPLVPG NDPTLLFTNS GMVQFKDVFL GTDKRPYVRA ASVQRCLRAG GKHNDLENVG YTARHHTFFE MLGNWSFGDY FKRDALVWAW ELLTQEYKLP ADKLWATVYQ TDDEAYDIWT KVIGLPPERV VRIGDNKGAP YASDNFWQMA ETGPCGPCSE IFYDHGPEIW GGPPGSPEAD GDRYIEIWNN VFMQFDRQLD PQTGEYTLTP LPAPCVDTGM GMERLAAILQ HVHSNYEIDL FQALVSAAAR ETNTKDLANN SLRVIADHIR ACAFLIVDGV IPGNEGRGYV LRRIIRRAIR HGYKLGCRAA FFHKLVDDLV KEMGEAYPEL REARDRVVDV LRTEEARFFE TIEHGMSILD GALGELKAAG KDEKQRMLDG ELAFKLHDTY GFPLDLTQDV CRENDVIVDE AAFDAAMNRQ REQARAAGKF KMAAGTLDYT GDKTTFHGYD QLLSETSRVT ALFVDGASVP EMRPGQTGVV VLDHTPFYAE SGGQVGDQGT LKAATVWFDV ADTQKVLPEV FGHQGTLRTG VLKVGDAVGA EVDAVRRART MRNHSATHLM HKALREVLGA HVQQKGSLVD ADKTRFDFSH NTPMTPLQIR EVEARVNAEI LANASTNAQM MGFDDAVKSG AMALFGEKYG DEVRVLTIGS SKELCGGTHV ARTGDIGLFK IVGESGVAAG IRRVEAITGD NVLHYLQTLD TRIGEAAAAL RAQPSELTQR IVQVQDQVKS LEKELERLKS KLAASQGDEL VSQAVDVAGI KVLAAKLDGA DAKTLRETMD KLKDKLKTAA IVLGSVSDGK VALIAGVTAD ATARIKAGEL VNFVAQQVGG KGGGRPDMAQ AGGTEPDKLP QALAGVTAWV QQKV
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