Gene RSc0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0790 
Symbol 
ID1219598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand- 
Start bp834370 
End bp834939 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content65% 
IMG OID637237152 
Productsignal peptide protein 
Protein accessionNP_518911 
Protein GI17545509 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.534784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCAT GGATCTGGAT GCTGGCGGGG GGGCTGAGCA CCTCCGCCCT TGCCGCGCCG 
TTCACGCCGG ACCTGGCGCA CACGGCGGTC TATTTCGGCG CATCGCATTT CGAGCGCACC 
ACCCTGCGCG GCCGTTTCGA CAAGATCGAC GGCGCCATCG ACTTCAACGA AGCGGACAAC 
CAGGGTGGCT TCGATTTCAC GATCGATGCC GCCTCGATCA ACACCCGTCT GCCGGAACTG 
GACGGCGTGC TGAAATCCGA GCAGTTCCTG GATGCCGCGC AGTTCCCGAT CGTCCGCCTG 
CGCAGCGACC GCTTCGTCGT GGAAGGCGGC AAGCTGGTCG CCGTGGAGGC CAGGCTGACG 
CTGCATGGCG TGACACAGCC GGTGCGCTTG GACGTGCGCC GCTTCAATTG CGGCGATATC 
AAACTGATTG CCGCCACGCT GCACGTCTGC GGCGGCGATT TCCACCTCGC CATCCGGCGC 
AGCGCGTTCG GCATGACGCG CTTCCTGCCG GAAGTCGGCG ACCGCGTCGA TCTGGAGATC 
AGCGTGGAAG CCTCGCCCAA ACAACCTTGA
 
Protein sequence
MRAWIWMLAG GLSTSALAAP FTPDLAHTAV YFGASHFERT TLRGRFDKID GAIDFNEADN 
QGGFDFTIDA ASINTRLPEL DGVLKSEQFL DAAQFPIVRL RSDRFVVEGG KLVAVEARLT 
LHGVTQPVRL DVRRFNCGDI KLIAATLHVC GGDFHLAIRR SAFGMTRFLP EVGDRVDLEI 
SVEASPKQP