Gene RSc0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0786 
Symbol 
ID1219594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp829489 
End bp832305 
Gene Length2817 bp 
Protein Length938 aa 
Translation table11 
GC content72% 
IMG OID637237148 
Producthypothetical protein 
Protein accessionNP_518907 
Protein GI17545505 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.447385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGGA TATTCGGAAT CATCGGCTTG ATCGTGGGCG CCGCGGTGGG CGGTGTCATG 
GGCGCCTTCC TGGGGGCGCT GATCGGCGTC GGCCTGGCGG CGGTCATTCT GCATCTGGAT
CAGCGCGCCA GTTCGCGGTG GGCGCACCCG GACGCCGACG CGCCGCCTGA TGCGGGCACC
CAGCCCGGCG TGCTGCCGGT CACCGAGCGC GTGGCGCGGC TCGAGCACGA GGTGGCGCTG
CTGCGGCGGC AGATCGCGGA GCTGAAAGGG CAGTCGTTCG CGACCGCGCC GTCGGTGCCG
GAGGCGCCGG AGCAGGCTGC GGCCGCACCG TTGCCCGATC TTGCTTCGGC AACGACCGAG
GTGCCGCCGC CCGTCATCTC GCCCGCGCCG ACCATCGCGC CGCAGCCGGC GGCCGTGTCC
GCCCCCGCCG CGGAGCCGGC GCCGCTGGAG CCGACATGGG CCGACCGGGC CGTGTCCGCC
GCGCGCGACT GGCTGCTGGG CGGCAACAGC GTGGTGCGGG TCGGCATCCT GATCCTGTTC
TTCGGCGTGG CCTTCCTGCT CAAGTACGCG GCGGACAACC GCCTGCTGCC GATCGAGTTC
CGCCTGGCCG GCGTGGCGCT GGCATCGATC GTGCTGCTCG CCGTCGGCTG GCGCCTGCGC
GACAAGCGCC CCGGCTATGC ACTGGTGCTG CAGGGGGGCG GGGTCGGCGT GCTCTACCTG
ACGGTCTTCG CGGCGACACG CATGGTGCCG CTGCTCCCGC CGGGCGCGGC GTTTGCGCTG
CTGGTGCTGA TCTGCGCGCT GGCGACCGGG CTGGCGGTCC GGCAGAACGC GCCGGCGCTG
GCCTTCACCG GCAGTGCGGG CGGGTTCCTG GCGCCGATCC TGATCTCGAC CGGCGCCGGC
AGCCATGTCG CGCTGTTCGG CTACTACGCG CTGCTCAACG CGGGCATCTT TGCCATTGCG
TGGTTCCGCG CGTGGCGAAT GCTGAATCTG CTGGGCTTCG TGTTCACCTT CGGCATCGCC
ACGGCGTGGG GCGTGCTGCG CTATGAGCCC GCGCTGCTGG CGAGTACCGA GCCCTTCCTC
ATCCTGTTTT TCCTGATGTA CGCGGGCATT GCGCTGCTGT ATGCGCTGCG CCGCCAGGTC
AGCCTCAGGC ACTACGTGGA CGGCACCCTG GTATTCGGCA CGCCGCTGGT GGCGATGGGC
CTGCAGGCCG CGCTGGTGCA GCACATCCCG TTTGCGATGG CGTGGAGCGC GACGGCGCTG
GCGGCGTTCT ACCTGGCCGT GGCGGCCTGG CTGGCGCCCC GGCGCTCGCA GCTGGGCCTG
CTGTTCGAGG TGATGCTCGC GCTGGGCGTG ATCTTCATCA CGCTGGCGAT TCCGCTGGCG
TTCGACGGGC GCACCACCAG TGCCGTGTGG GCGCTGGAAG GCGCCGCCGT GGTGTGGGCG
GGCGTGCGCC AGCAGCGCCG GCTGGCGCTG GCGGCCGGCC TGCTGCTGCA ACTGGCGGCG
GGCGTGGCCT TCGGGATCGG GCAACGCTTC GAGTGGTCGG CGTCGGCGGG CTGGCCGGTG
CTCAACAGCC GCTGCATCGG CGGGCTGCTG ATCGCGGCGG CCGGCGTGTT CAGCGGCTGG
CGCCTGCAGG GCAAGACCGA GGCGCGCGAC TGGCTGAAGG CCGCGCCGGG GTTGGGCATC
GCCGCGTCGG TGTGGGGGCT GCTGTGGTGG CTGGGCAGCG GCAGCGGAGA AATCGACCGC
TGGGCATGGC GCCTGCGCAG CGCGCTCGTC GACCGGCCGG ACATTCCGCT CTACGCCGCC
TTTGCCGTGC TGACCGCGTG GCTGGCGCAC GGGCTGCGCC GCCGGCTCGA CTGGGCGCTC
GCCGAGTGGC CGGCATTGGC GCTGGCTCCC GCGCTCGGGC TGGTGGCGAT CGCGGCGTGC
GGGCACTGGG TGCCGTCGCC GCTGGCGGGC TGGGGCGGGC TGGCGTGGAT CGCCTCGGTG
GCGCTGGCCT TCGCGCTGCT GCGCCGCCAG GAGCGCGACG TGGGCGATGC CATCCTGGCG
CCGCTGCACA CCGTGCTGTT CTGGCTGATC TGCGGCGTGC TGGCCACCGA AGGCTACTGG
CGCCTGAACG CCTACGTGCC GGAAGGCACC TGGAGCTTCG CGGCCTGGGC GTACGCCTAT
GGCACGTTGC TGGCGCTGCT GGCCGGCGCG GGCTGGCGCA TCCGCTGGCC GATCGCCCGC
TTCGAGCGCG CCTATCTGCT GTGGGGCGCC GCGCCGCTGG CCGCGCTGCT GTGGCTGTGG
AGCCTGGCGG GCGCCGCCAG CGACGGCAAC GCCGCGCCGC TGTTCTACCT GCCGATCCTC
AACCCGCTGG ACGTGGCACA GCTGCTGGTG TTCCTGGCGA TCGCGCTGTG GATGCGCCGC
ACCGCGCTGC AGCACCTGGT ACCGCAGCCC GCGGTGATCG GCTACGCGGT CGGCGCGACC
CTGTTCATCT GGGCCAACGC GGTGCTGCTG CGCACGCTGC ACCATTGGGC GCACGTGCCG
TACACCGCGG ACGGCCTGGG CAACTCGATG CTGGTGCAGG CTTCGCTGTC GATGTTCTGG
ACCGTGCTGG CGCTGGCGGT GATGGTGGCC GCCACGCGGC GGGCCAGCCG CGCGCTGTGG
TTCACCGGCG CGGTGCTGCT GGGGGTGACC GTGGTCAAGC TGTTCCTGTT CGACCTGTCG
CGCGTGACGG GGGTCGAGCG CATCGTTTCG TTCATCGGCA TTGGCGTGCT GCTGCTGCTG
ATCGGCTATC TGTCGCCGTT GCCGCCGAAG GCCAGGGTGG AGGAGAGGCC GGCATGA
 
Protein sequence
MRWIFGIIGL IVGAAVGGVM GAFLGALIGV GLAAVILHLD QRASSRWAHP DADAPPDAGT 
QPGVLPVTER VARLEHEVAL LRRQIAELKG QSFATAPSVP EAPEQAAAAP LPDLASATTE
VPPPVISPAP TIAPQPAAVS APAAEPAPLE PTWADRAVSA ARDWLLGGNS VVRVGILILF
FGVAFLLKYA ADNRLLPIEF RLAGVALASI VLLAVGWRLR DKRPGYALVL QGGGVGVLYL
TVFAATRMVP LLPPGAAFAL LVLICALATG LAVRQNAPAL AFTGSAGGFL APILISTGAG
SHVALFGYYA LLNAGIFAIA WFRAWRMLNL LGFVFTFGIA TAWGVLRYEP ALLASTEPFL
ILFFLMYAGI ALLYALRRQV SLRHYVDGTL VFGTPLVAMG LQAALVQHIP FAMAWSATAL
AAFYLAVAAW LAPRRSQLGL LFEVMLALGV IFITLAIPLA FDGRTTSAVW ALEGAAVVWA
GVRQQRRLAL AAGLLLQLAA GVAFGIGQRF EWSASAGWPV LNSRCIGGLL IAAAGVFSGW
RLQGKTEARD WLKAAPGLGI AASVWGLLWW LGSGSGEIDR WAWRLRSALV DRPDIPLYAA
FAVLTAWLAH GLRRRLDWAL AEWPALALAP ALGLVAIAAC GHWVPSPLAG WGGLAWIASV
ALAFALLRRQ ERDVGDAILA PLHTVLFWLI CGVLATEGYW RLNAYVPEGT WSFAAWAYAY
GTLLALLAGA GWRIRWPIAR FERAYLLWGA APLAALLWLW SLAGAASDGN AAPLFYLPIL
NPLDVAQLLV FLAIALWMRR TALQHLVPQP AVIGYAVGAT LFIWANAVLL RTLHHWAHVP
YTADGLGNSM LVQASLSMFW TVLALAVMVA ATRRASRALW FTGAVLLGVT VVKLFLFDLS
RVTGVERIVS FIGIGVLLLL IGYLSPLPPK ARVEERPA