Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0785 |
Symbol | |
ID | 1219593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 828729 |
End bp | 829277 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637237147 |
Product | hypothetical protein |
Protein accession | NP_518906 |
Protein GI | 17545504 |
COG category | [S] Function unknown |
COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.275358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.164978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGA AATCCACGAT CTACAAGGTC GATCTGCAGA TCGCCGACAT GGATCGCCAC TACTACGGCA GCCACGCGCT GACCGTCGCC CGCCACCCGA GCGAGAACGA CGAGCGCATG ATGGTGCGCG TGCTCGCCTT CGCCCGGCAC GCCAGCGAGA CGCTCGCCTT CACGCGCGGC CTCTCCGAGC CCGACGAACC CGACCTGTGG CAGCGCGACC TGACCGACGC CGTGGAACTG TGGATCGACC TGGGCAATCC GGACGAGACG CGCATCCGCA AGGCATGCAA CCGCTCGCAG CAAGTGGCCG TGTACACCCA CAGCGGCAAC GCCACGCGCG TGTGGTGGCA GCAGACCGGA ACCAAGGTGG CGCGCTTCGC CAACCTGTCG GTCTATGAAG TCGCGCCCGA CACCGTGGCC GCGCTCGCCG CGCTGGTAGA GCGCTCGATG CGGCTGCAGG TCACCATCCA GGACGGCGAC ATCTGGATCG CCGACGACGC GGACAACATC CAGGTCCGGC TCGATACGCT CAAGGCCGCC GGCGCCTGA
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Protein sequence | MALKSTIYKV DLQIADMDRH YYGSHALTVA RHPSENDERM MVRVLAFARH ASETLAFTRG LSEPDEPDLW QRDLTDAVEL WIDLGNPDET RIRKACNRSQ QVAVYTHSGN ATRVWWQQTG TKVARFANLS VYEVAPDTVA ALAALVERSM RLQVTIQDGD IWIADDADNI QVRLDTLKAA GA
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