Gene RSc0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0771 
Symbol 
ID1219578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp813642 
End bp815261 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content68% 
IMG OID637237132 
Productputative transmembrane dehydrogenase (large subunit) oxidoreductase protein 
Protein accessionNP_518892 
Protein GI17545490 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0952307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0474982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA CCCGACAGGC CGAGCAGGCC GATATCGTGG TGGTGGGTTC CGGCGTGGCC 
GGCGCGCTGG TGGCGTACGA GCTGGCGCGC GCGGGCAAGT CGGTGCTGAT GCTGGAGGCC
GGGCCCCGCT TGCCGCGCTG GGAGATCGTC GAGCGCTTCC GCAACCAGGC CGACAAGATG
GATTTCATGG CGCCGTATCC GTCCACGCCC TGGGCGCCGC ACCCGGAGTA CGGGCCGGAC
AACAACTACC TGATCCTCAA GGGCGAGCAC AAGTTCGACT CGCAGTACAT CCGCGCGGTG
GGCGGCACGA CGTGGCATTG GGCGGCCTCC ACGTGGCGCT TCCTGCCGAA CGATTTCAAG
CTGCGCAGTG TCTACGGCAT CGCGCGCGAC TGGCCGATCC AGTACGACGA CCTGGAGCGC
TACTACGGCC GAGCGGAAGC GGCGCTGGGC GTGTGGGGGC CGAACGACGA GGAACTCGGC
TCACCGCGCA GCCAGCCGTA TCCGATGGCG CCGCTGCCGC TGTCGTTCAA CGAGCGCACC
GTCAAGGACG CGCTCAACGC GCACGATCCG GCCCTGCGCG TGGTCACCGA GCCGGTGGCG
CGCAACAGCC GCCCGTACGA CGGCCGACCG ACCTGCTGCG GCAACAACAA CTGCATGCCG
ATCTGTCCGA TCGGGGCGAT GTACAACGGC ATCGTCCACG TGGAGAAGGC CGAGCAGGCC
GGCGCGCGCC TGATCGAGAA CGCGGTGGTC TACAAGCTGG AGGTGGGCGC GGGCAAGCGC
ATCGTCGCCG CGCACTACAA GGACCCGAAG GGCGTCGACC ACCGGGTCGA GGGCAAGTGG
TTCGTGCTGG CCGCCAACGG CATCGAAACT CCCAAGCTGA TGCTGATGTC GACCGGCGCG
GATTTTCCGA AGGGTGTGGG CAACCGTTCG GACATGGTCG GCCGCAACCT GATGGACCAC
CCGGGCACCG GTGTGAGCTT CTACGCCGAC CGCAAGCTGT GGCCGGGCCG CGGCCCGCAG
GAGATGACCT CGCTGATCGG CTTCCGCGAC GGACCGTTCC GCGCCACGCA GGCGGGCAAG
AAGCTGCACC TGTCGAACAT CTCGCGCATC GAGCAGGAGA CCACGCGCAT CTTCAAGGCA
GGCAAGCTGC TCAAGCCTGC CGAACTGGAC GCGCGCATTC GCGACCAGGC CGCGCGCTAC
GTGCAGTTCG ACAGCTTCCA CGAGATCCTG CCGTTGCCCG AGAACCGCAT CGTGCCGAGC
GCGACCGGGA CCGATGCGCT GGGCATTCCG CGTCCCGAGA TCACCTACCG CATCGACGAC
TACGTCAAGC GCAGCGCCGT CCACACGCGC GAGGTCTATG CGACGGCGGC CAGGGTGCTG
GGCGGCACCG ACGTGCAGTT CCACGACGAC TTCGCGCCCA ACAACCACAT CACCGGCGCG
ACCATCATGG GGTCGGACCC GAAGGACTCC GTGGTCGACA AGGACTGCCG CACCTTCGAC
CATCCCAACC TGTTCATCAG CAGCAGCGCG ACGATGCCGA CGGTCGGCAC CGTCAACGTG
ACGCTGACCA TCGCGGCGCT GGCCCTGCGC ATTGCCGATC AGCTCAAGAA GGAGGCATGA
 
Protein sequence
MAETRQAEQA DIVVVGSGVA GALVAYELAR AGKSVLMLEA GPRLPRWEIV ERFRNQADKM 
DFMAPYPSTP WAPHPEYGPD NNYLILKGEH KFDSQYIRAV GGTTWHWAAS TWRFLPNDFK
LRSVYGIARD WPIQYDDLER YYGRAEAALG VWGPNDEELG SPRSQPYPMA PLPLSFNERT
VKDALNAHDP ALRVVTEPVA RNSRPYDGRP TCCGNNNCMP ICPIGAMYNG IVHVEKAEQA
GARLIENAVV YKLEVGAGKR IVAAHYKDPK GVDHRVEGKW FVLAANGIET PKLMLMSTGA
DFPKGVGNRS DMVGRNLMDH PGTGVSFYAD RKLWPGRGPQ EMTSLIGFRD GPFRATQAGK
KLHLSNISRI EQETTRIFKA GKLLKPAELD ARIRDQAARY VQFDSFHEIL PLPENRIVPS
ATGTDALGIP RPEITYRIDD YVKRSAVHTR EVYATAARVL GGTDVQFHDD FAPNNHITGA
TIMGSDPKDS VVDKDCRTFD HPNLFISSSA TMPTVGTVNV TLTIAALALR IADQLKKEA