| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0767 |
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| Symbol | pdxH1 |
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| ID | 1219574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 809440 |
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| End bp | 810078 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237128 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | NP_518888 |
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| Protein GI | 17545486 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.127871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTCCA TCGCCGACAT CCGCACCGAC TACGCCCGCG CCTCCCTCGA CATCGCCGAC
GTCGATCCCA ACCCGCTGCG GCAGTTCCGC CGCTGGTTCG ACGAAGCCAT CCGGGCCGAA
GTGGCCGAGG TCAACGCCAT GACGCTGGCC ACCGTGGACC CGCAAGGCCA GCCGTCCGCC
CGTATCGTCC TGCTGAAGAA CCTGGACGAG CGCGGCTTCA CCTTCTTCAC CAACTACTGC
AGCCACAAGG GCGAGGAACT GGCCGCCAAC CCGCACGCGG CGCTGCTGTT CCACTGGATC
GGGCTGGAGC GCCAGGTGCG CGTCCAGGGC GTGGTGGAAA AAGTGAGCGA AGCCGAGAGC
GATGCCTACT ACCACTCGCG CCCGCTCGGC TCGCGCCTGG GCGCCTGGGC CTCGGAGCAG
AGCAGCGAGG TGCCCGACCG CGCCGTGCTG GAGGCGCGCG AGGCCGAATA CCGCGAACGC
TTCGGCGACG CGCCGCCGCG TCCGCCGCAC TGGGGCGGCT ACCGGCTGCT GCCGGAACGC
ATCGAGTTCT GGCAGGGCCG GCCCTCGCGG CTGCACGATC GGCTGGAATA CCGCCGCCAG
CCGGACGGCG GCTGGCACAT CGTCCGTCTC GCCCCCTGA
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| Protein sequence | MTSIADIRTD YARASLDIAD VDPNPLRQFR RWFDEAIRAE VAEVNAMTLA TVDPQGQPSA
RIVLLKNLDE RGFTFFTNYC SHKGEELAAN PHAALLFHWI GLERQVRVQG VVEKVSEAES
DAYYHSRPLG SRLGAWASEQ SSEVPDRAVL EAREAEYRER FGDAPPRPPH WGGYRLLPER
IEFWQGRPSR LHDRLEYRRQ PDGGWHIVRL AP
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