| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0761 |
|---|
| Symbol | |
|---|
| ID | 1219568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 804749 |
|---|
| End bp | 805279 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637237122 |
|---|
| Product | transcription regulator protein |
|---|
| Protein accession | NP_518882 |
|---|
| Protein GI | 17545480 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.308793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCG ATACCACCGA TCTGCGCATT CTCCAGGTCC TGCAGGAGGA TGGCCGCATC
AGCAACCAGG ACCTGGCCGA GCGCGTGGCG CTGTCGCCGT CGGCCTGCCT GCGGCGGGTG
CGGATGCTGG AGGAGGGGGG CGCCATCACC GGCTATCGCG CGCGGCTCGG GCGGGCGGCG
CTCGGGCTGG AGCTGGAGGC CATCGTGCAG GTGTCGATGC GGCAGGATGT GTCCGGCTGG
CACGAGACCT TCATGGAGGC GGTGCAGCAG TGGCCGGAGA TCGTCGCGGC GTACATCATC
ACCGGGGACT GCAACTACAT CCTGCGCGTG CAGGCGCCCA ACCTGCAGCA CTATTCCGAG
TTCATCATCG AGCGGCTGTA CAAGACGCCG GGCGTGATGG ACATTCGCTC GAACATCGTG
CTGCGCACGC TCAAGGAGCG CGAGGGCGGG CTGGCCCTGC TGATGGAGGC GCGCGGCGTG
CGGCCGCTGG AGGCGGGGGC CGGCAAGCGT GGCAAGGCGG GCAGTTCCTG A
|
|---|
| Protein sequence | MQLDTTDLRI LQVLQEDGRI SNQDLAERVA LSPSACLRRV RMLEEGGAIT GYRARLGRAA
LGLELEAIVQ VSMRQDVSGW HETFMEAVQQ WPEIVAAYII TGDCNYILRV QAPNLQHYSE
FIIERLYKTP GVMDIRSNIV LRTLKEREGG LALLMEARGV RPLEAGAGKR GKAGSS
|
|---|
| |