Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0757 |
Symbol | |
ID | 1219564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 800954 |
End bp | 801775 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637237118 |
Product | putative transcription regulator protein |
Protein accession | NP_518878 |
Protein GI | 17545476 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.702706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACCG AGAGTCTCCC CGATACCGAA TCCGGCGCCG GACGCGAAGG CGATCCGAAC TTCGTCACGG CCCTGGCGCG CGGGCTGGAA CTGCTGCGCG CGTTCCGCCC CGGCGACACG CTGCTCGGCA ACCAGGAGTT CGTGCGCCGC ACCGGCTTTC CCAAGGCCAC CGTCAGCCGG CTGGCCGGTA CGCTGGTCGC GCTCGGCTAC CTGCGCTATG ACGATGCGCT TGGCAAGTAC GGGCTCGACG CGGGCGTGCT GGCGCTGGGG TTCGCCTACC TGGCTTCGAG CGACGTGGTG CAGCTGGCGC GTCCGCACAT GAGCGCGTTC GCGCAGCGGC ACGGCGTGTC GATTTCGCTC GGCCGACGCG AGCGGCTGGA CATGGTCTAC CTGGAAACGA TCCGCCACGA CAGCCCGGCA ATGGGCGGCT CGTCGGGGCT GGGTGTGGGC TCGCGGCTGT CGATGCTGTC GAGCTCGATG GGGCGGGCCT ATCTGGCCGC GCTGCCGGCG GCGCGGCGCG AGCGGCGATA CGACGCGCTG CGCACGCAGC AGCCCGCGCA ATGGGCCGCC GAGGGCGCGG CTGCCACGGA TGCGGTCAAG GCCGGCGTCC GCGAGGGCTA CGCGGTGTCG CTGCGCGAGT GGCATCCTGC CATCCACGCC TGCGCGGTGG CGTTTTTCGT GCCGGGCCAG CGCGAGCCCT ATGTGGTCAG CTGCAGCGCG CCGCATACGG CGGCCGATGC CGGGCGCATC CGCGCCGAAC TGGTGCCCGC CTTGCGGGAA CTGGCGGCGC GGCTGGGGCA GTTGGCCCAA CCGACCGGAT AA
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Protein sequence | MRTESLPDTE SGAGREGDPN FVTALARGLE LLRAFRPGDT LLGNQEFVRR TGFPKATVSR LAGTLVALGY LRYDDALGKY GLDAGVLALG FAYLASSDVV QLARPHMSAF AQRHGVSISL GRRERLDMVY LETIRHDSPA MGGSSGLGVG SRLSMLSSSM GRAYLAALPA ARRERRYDAL RTQQPAQWAA EGAAATDAVK AGVREGYAVS LREWHPAIHA CAVAFFVPGQ REPYVVSCSA PHTAADAGRI RAELVPALRE LAARLGQLAQ PTG
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