| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0756 |
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| Symbol | gcdH |
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| ID | 1219563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 799647 |
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| End bp | 800954 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237117 |
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| Product | glutaryl-CoA dehydrogenase oxidoreductase |
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| Protein accession | NP_518877 |
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| Protein GI | 17545475 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.366151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAGGAA AGAGTAGAAA TTGCCGTCGG CTGCGTTATG ATAAACCTAA ATTTCGAAAC
ACTGTTCCGT ATTACGGAAC CACAGTGCAG AGATCCGATC CGGAGACCAC CGCCATGACC
GCTCGCAACG CCTTCCACTG GGCCGATCCC TTGCTGCTCG ACGCGCAGCT CACCGACGAC
GAGCGCATGG TGCGCGATGC CGCCGCCGCC TACGCGCAGG ACAAGCTGAT GCCGCGCGTG
CTGGAATCGT TCCGGCACGA GAAGACCGAC ACGGCGATCT TCCGCGAGAT GGGCGCGCTG
GGCATGCTCG GCCCCACGAT CCCCGAGCAG TACGGCGGCC CGGGCCTGAA CTACGTCAGC
TATGGCCTGA TCGCGCGCGA GGTGGAGCGT GTCGACTCGG GCTACCGCTC GATGATGAGC
GTGCAGTCGT CGCTGGTGAT GGTGCCCATC CACGCGTTCG GCAGCGAGGC ACAGAAGCAG
AAATACCTGC CCAGGCTGGC GACCGGCGAA TGGATCGGCT GCTTCGGCCT GACCGAGCCC
AACCACGGCT CCGACCCGGC TTCGATGGTC ACGCGCGCGA AAAAGGTGGA TGGCGGCTAC
TCGCTGAGCG GCGCCAAGAT GTGGATCACC AACTCGCCCA TCGCCGACGT CTTCGTGGTG
TGGGCCAAGC TGCCGGACGA CAACGGTGAA GACCAGATCC GCGGCTTCAT CCTGGAGAAG
GGCTGGAAGG GCCTGTCCGC CCCCGCCATC CACGGCAAGG TCGGCCTGCG CACCTCGATC
ACCGGCGAGA TCGTGCTCGA CGAGGTGTTC GTGCCCGAAG AGAACCTGAT GCCCGGCGTG
CACGGCCTCA AGGGCCCGTT CACCTGCCTG AACTCCGCGC GCTACGGCAT CGCCTGGGGC
GCGCTCGGCG CGGCCGAGTC CTGCTGGCAC ACCGCGCGCC AGTACGTGCT GGACCGCACG
CAGTTCGGCC GCCCGCTCGC CGCCAACCAG CTGATCCAGA AGAAGCTCGC CGACATGCAG
ACCGAGATCA CGCTCGGCCT GCAGGGCTGC CTGCGCCTGG GCCGCATGAA GGACGAAGGC
ACCGCCGCGG TGGAAATCAC CTCGATCATG AAACGCAACT CGTGCGGCAA GGCGCTCGAC
ATCGCCCGCA TGGCGCGCGA CATGCTGGGC GGCAACGGCA TCTCCGACGA GTTCGGCGTG
ATCCGTCACG TCGTGAACCT GGAGGTGGTC AACACCTACG AGGGCACGCA CGATATCCAC
GCCCTGATCC TGGGCCGCGC GCAGACGGGC ATCCAGGCGT TCTTCTGA
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| Protein sequence | MQGKSRNCRR LRYDKPKFRN TVPYYGTTVQ RSDPETTAMT ARNAFHWADP LLLDAQLTDD
ERMVRDAAAA YAQDKLMPRV LESFRHEKTD TAIFREMGAL GMLGPTIPEQ YGGPGLNYVS
YGLIAREVER VDSGYRSMMS VQSSLVMVPI HAFGSEAQKQ KYLPRLATGE WIGCFGLTEP
NHGSDPASMV TRAKKVDGGY SLSGAKMWIT NSPIADVFVV WAKLPDDNGE DQIRGFILEK
GWKGLSAPAI HGKVGLRTSI TGEIVLDEVF VPEENLMPGV HGLKGPFTCL NSARYGIAWG
ALGAAESCWH TARQYVLDRT QFGRPLAANQ LIQKKLADMQ TEITLGLQGC LRLGRMKDEG
TAAVEITSIM KRNSCGKALD IARMARDMLG GNGISDEFGV IRHVVNLEVV NTYEGTHDIH
ALILGRAQTG IQAFF
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