Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0754 |
Symbol | |
ID | 1219561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 797056 |
End bp | 797694 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637237115 |
Product | antioxidant oxidoreductase protein |
Protein accession | NP_518875 |
Protein GI | 17545473 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.192207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTAC GTCTGGGCGA TATCGCCCCC GATTTCGAGC AGGATTCCAG CGAAGGCCGC ATCCAGTTCC ACACGTGGCT GGGGAACAGC TGGGGCGTGC TTTTCTCGCA TCCGGCGGAC TTTACGCCGG TGTGCACCAC CGAGCTGGGG CTGACCGCCA AGCTCAAGGA CGCGTTTGCC AAGCGCAACG TCAAGGTCAT TGCCCTGTCG GTGGATCCGG TCGATTCGCA CAAGAAATGG ATCGACGACA TCAATGAGAC ACAGAACACC CGCGTCAACT TCCCGATCAT CGCCGATGCC GACCGCAAGG TCTCGCAGCT CTACGACATG ATCCACCCGA ACGCGAGCGA GACGTTCACC GTGCGCTCGC TATTCGTGAT CGACCCGAAC AAGAAGGTGC GGCTGACCAT CACGTATCCC GCGTCCACGG GGCGCAACTT CGACGAGGTG CTGCGCGTGA TCGATTCGCT GCAGCTGACG GACCACCACA GCGTGGCTAC GCCGGGCAAC TGGAAGGACG GCGACGACGT CGTCATCGTG CCGTCGCTGA AGGACGAAGA GGTCATCAAG CAGAAATTCC CGAAGGGCTA CAAGGCCGTG CGGCCGTATC TGCGCCTGAC GCCGCAGCCC AACAAGTGA
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Protein sequence | MSLRLGDIAP DFEQDSSEGR IQFHTWLGNS WGVLFSHPAD FTPVCTTELG LTAKLKDAFA KRNVKVIALS VDPVDSHKKW IDDINETQNT RVNFPIIADA DRKVSQLYDM IHPNASETFT VRSLFVIDPN KKVRLTITYP ASTGRNFDEV LRVIDSLQLT DHHSVATPGN WKDGDDVVIV PSLKDEEVIK QKFPKGYKAV RPYLRLTPQP NK
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