Gene RSc0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0754 
Symbol 
ID1219561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp797056 
End bp797694 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content61% 
IMG OID637237115 
Productantioxidant oxidoreductase protein 
Protein accessionNP_518875 
Protein GI17545473 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.192207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTAC GTCTGGGCGA TATCGCCCCC GATTTCGAGC AGGATTCCAG CGAAGGCCGC 
ATCCAGTTCC ACACGTGGCT GGGGAACAGC TGGGGCGTGC TTTTCTCGCA TCCGGCGGAC
TTTACGCCGG TGTGCACCAC CGAGCTGGGG CTGACCGCCA AGCTCAAGGA CGCGTTTGCC
AAGCGCAACG TCAAGGTCAT TGCCCTGTCG GTGGATCCGG TCGATTCGCA CAAGAAATGG
ATCGACGACA TCAATGAGAC ACAGAACACC CGCGTCAACT TCCCGATCAT CGCCGATGCC
GACCGCAAGG TCTCGCAGCT CTACGACATG ATCCACCCGA ACGCGAGCGA GACGTTCACC
GTGCGCTCGC TATTCGTGAT CGACCCGAAC AAGAAGGTGC GGCTGACCAT CACGTATCCC
GCGTCCACGG GGCGCAACTT CGACGAGGTG CTGCGCGTGA TCGATTCGCT GCAGCTGACG
GACCACCACA GCGTGGCTAC GCCGGGCAAC TGGAAGGACG GCGACGACGT CGTCATCGTG
CCGTCGCTGA AGGACGAAGA GGTCATCAAG CAGAAATTCC CGAAGGGCTA CAAGGCCGTG
CGGCCGTATC TGCGCCTGAC GCCGCAGCCC AACAAGTGA
 
Protein sequence
MSLRLGDIAP DFEQDSSEGR IQFHTWLGNS WGVLFSHPAD FTPVCTTELG LTAKLKDAFA 
KRNVKVIALS VDPVDSHKKW IDDINETQNT RVNFPIIADA DRKVSQLYDM IHPNASETFT
VRSLFVIDPN KKVRLTITYP ASTGRNFDEV LRVIDSLQLT DHHSVATPGN WKDGDDVVIV
PSLKDEEVIK QKFPKGYKAV RPYLRLTPQP NK