| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0742 |
|---|
| Symbol | cheZ2 |
|---|
| ID | 1219549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 787949 |
|---|
| End bp | 788611 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637237103 |
|---|
| Product | chemotaxis regulator CheZ |
|---|
| Protein accession | NP_518863 |
|---|
| Protein GI | 161621734 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3143] Chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.487627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA TGCACGATGG CAGCCCCGTC CAGGCTGACA GGGCTGCCGC GGATGCCGAA
CCCTTGCCCG ACATGCTGCA GCGGATCGGG TATCTGACCC GCATGCTGCG CGAAAGCCTG
CGTGAACTGG GCCTGGACAA AGGCATCGAA CGCGCTGCGT CCGCCATTCC CGACGCGCGC
GATCGGCTGA ACTACGTCGC GAACATGACG GAGCAGGCGG CCATGCGCGC CCTGAATGCC
ATCGATGCGG CTCGCCCGGT GCAGGACGCC TTGGCGGGCG AGGCGGAGGC GCTGGTCAGG
CGCTGGCAGG CCTGGATGGA CCGCCGGTTG AGCGACGAGG AGATTCGCGA CCTGGTGGGC
GAGACCCGCG GCTTCCTGCG CGACGTGCCG CAGAAGACCC GCGACACCAA CCAGCAGTTG
ATGGAGATTC TGATGGCGCA GGATTTCCAG GACCTGACCG GCCAGGTGAT CAAGAAGGTG
CTGGATTTGA TCCAGTTCAT TGAGACCGAG CTGATCGGCA TCCTGACGGA CAACGCGCCC
GCGCATCGGA GCGCGGAGGT CGCGCCGACG CTGCTCAACG GTCCGCAGGT CAATCCCGAT
CCCCCCGACG TGGTCGCCGG CCAGGAACAG GTGGACGATC TGCTGGAAAG CCTGGGTTTC
TGA
|
|---|
| Protein sequence | MSEMHDGSPV QADRAAADAE PLPDMLQRIG YLTRMLRESL RELGLDKGIE RAASAIPDAR
DRLNYVANMT EQAAMRALNA IDAARPVQDA LAGEAEALVR RWQAWMDRRL SDEEIRDLVG
ETRGFLRDVP QKTRDTNQQL MEILMAQDFQ DLTGQVIKKV LDLIQFIETE LIGILTDNAP
AHRSAEVAPT LLNGPQVNPD PPDVVAGQEQ VDDLLESLGF
|
|---|
| |