Gene RSc0736 details

Gene Information

• Locus tag: RSc0736
• Symbol: pal
• ID: 1219542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 782996
• End bp: 783514
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637237096
• Product: peptidoglycan-associated lipoprotein precursor
• Protein accession: NP_518857
• Protein GI: 17545455
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.947366
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGAAGT CTCAAACCAT GATCAAGCTG GCGGCGATTG CCGCGCTGCT GGCGCTGGGC 
GCTTGCAGCT CGGGTGTGAA GCTGGATGAC ACCTCGAAGA ACGCCACGGG TGGTGCCGCC 
GCCGGTGCCG ACACCCGCAA CGTGACGCCC GTCGACGTGA GCCGCGATGA ACTGACCGAT 
CCGAACAGCC CGCTGGCCAA GCGCAGCGTG TACTTCGATT TCGACAGCTA CACCGTCAAG 
CCGGAATACC AGGGCCTGCT GACCCAGCAT GCGCGCTACC TGCAGTCGCA CAACCAGCGC 
AAGGTGCTGA TCCAGGGCAA CACCGACGAG CGCGGCACCA GCGAGTACAA CCTGGCGCTG 
GGCCAGAAGC GTGCCGAGGC CGTGCGCCGC GCGCTGTCCT CGCTGGGCGT GCCCGACAGC 
CAGATGGAAT CCGTGAGCCT GGGCAAGGAA AAGCCGCAGG CCTCGGGCCA CGACGAGGAG 
TCGTGGGCAC AGAACCGCCG CTCCGATATC GTCTACTGA 

 

Protein sequence

MPKSQTMIKL AAIAALLALG ACSSGVKLDD TSKNATGGAA AGADTRNVTP VDVSRDELTD 
PNSPLAKRSV YFDFDSYTVK PEYQGLLTQH ARYLQSHNQR KVLIQGNTDE RGTSEYNLAL 
GQKRAEAVRR ALSSLGVPDS QMESVSLGKE KPQASGHDEE SWAQNRRSDI VY