| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0735 |
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| Symbol | tolB |
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| ID | 1219541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 781673 |
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| End bp | 782971 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637237095 |
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| Product | translocation protein TolB |
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| Protein accession | NP_518856 |
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| Protein GI | 17545454 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.9087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.380909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGGA ATGTTTGGAA GTCTGGACTT CGACGATCGG CCTGGATCGG GCTGCTGATG
GTGTTGTGCG TCGGGGTTGC GCGCGCCCAG CTGTATGTGG AAATCGCCGG GGCCGGTTCG
AGCCAGTACC CCATCGCCAT TGCCAATTTC CAGGGCGAAT CGCAGATTCC GCAGGACATC
ACGGCCATCG TCCGGGCCGA TCTGGTGCAC AGCGGCCGCT TTTCCAATGT CGATGTGGCG
GGCGCGGTGG TGCCGGACAG CCCGGCCCCC GACCTGGGCG CCTGGAAGAG CCGTGGCGCG
GCTGCGTTCG TCGGCGGCAC CGTGACGCGC AACGGCGATC GCTACGAGAT CCGCTTCCGC
CTGTACGACA CGGCCAAGGG GGAAAGCCTG GGCGGCCTGG CGCTGACGCG CGGCGAAGGG
CAACTGCGGC TGGCGGCGCA TGAGATCGCC GACTACATCT ACCAGAAGCT GATCGGTGAT
CGCGGTGTCT TTGCGACCCG CCTGTCGTAT GTGTCCAAGG TGGGCCGCCG GTACCAGTTG
CAGATTTCCG ATTCCGACGG GGCCAACCCG CAGGTGGCGC TGACCAGCAA CGAGCCGATC
ATTTCGCCGG CGTGGTCGCC GGACGGCACC AAGGTCGCCT ACGTGTCGTT CGAGAGCCGC
AAGCCGGTGG TGTATGTGCA TGACCTGATC TCGGGCCGCC GGGCGGTGAT CTCGAACCAG
AAGGGCAACA ACTCGGCGCC GGCCTGGTCG CCGGACGGGC GCCGCGTGGC GGTGGCGCTG
TCGCGCGACG GCAATACGCA GATCTACCAG GTCAACGCCG ACGGCTCGGG CCTGCGCCGC
CTGACCCGCA GCAGCGCGAT CGATACCGAG CCGTCGTTCT CGCCGGACGG CCGCTCGATC
TACTTCACCA GCGACCGCGG CGGCGCGCCC CAGATCTATC GCATGCCGAC CGAAGGCGAA
GACGCCGGCA GCGCGCAGCG CGTGACGTTC AAGGGCGGCT ACAACACCAG CCCGCGCGTG
TCGCCGGACG GCAAGCTGCT GGCCTACATC TCGCGGGTGG GCGGGGCCTT CAAGCTGTAT
GTGCAGGACC TGTCCAATGG TGACGTCACC GGGCTGACCG ACACGTCCTA TGACGAATCG
CCGAGCTTTG CCGCCAACGG CAAGTTCATC CTCTATGCCA CCCGCGTAGG CGGGCGATCG
GTGCTGGCGG CGGTGTCAAC CGACGGCCGC ACGCGCCAGA TTCTTTCCCT CCAGGCCGGC
ACGGTCCGCG AGCCGGCGTG GGGCCCTTTC ATGCAATAA
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| Protein sequence | MMRNVWKSGL RRSAWIGLLM VLCVGVARAQ LYVEIAGAGS SQYPIAIANF QGESQIPQDI
TAIVRADLVH SGRFSNVDVA GAVVPDSPAP DLGAWKSRGA AAFVGGTVTR NGDRYEIRFR
LYDTAKGESL GGLALTRGEG QLRLAAHEIA DYIYQKLIGD RGVFATRLSY VSKVGRRYQL
QISDSDGANP QVALTSNEPI ISPAWSPDGT KVAYVSFESR KPVVYVHDLI SGRRAVISNQ
KGNNSAPAWS PDGRRVAVAL SRDGNTQIYQ VNADGSGLRR LTRSSAIDTE PSFSPDGRSI
YFTSDRGGAP QIYRMPTEGE DAGSAQRVTF KGGYNTSPRV SPDGKLLAYI SRVGGAFKLY
VQDLSNGDVT GLTDTSYDES PSFAANGKFI LYATRVGGRS VLAAVSTDGR TRQILSLQAG
TVREPAWGPF MQ
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