| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0729 |
|---|
| Symbol | glyA |
|---|
| ID | 1219535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 776547 |
|---|
| End bp | 777794 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637237089 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | NP_518850 |
|---|
| Protein GI | 17545448 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAC GCAACCGCTA TACGATCGAC CAGATCGACC CAGAAGTCTT CGCCGCCATC
CAGCAGGAAA ACCAGCGCCA GGAAGACCAC ATCGAGCTGA TCGCCTCCGA GAACTACACC
TCGCCGGCCG TGATGGCCGC CCAGGGCTCG CAGCTGACCA ACAAGTATGC CGAGGGCTAT
CCCGGCAAGC GCTACTACGG TGGCTGCGAA TACGTGGACG TGGTCGAGCA GCTCGCCATC
GACCGCGTGA AGCAACTGTT CGGCGCCGAG GCCGCCAACG TGCAGCCGAA CTCCGGCTCG
CAGGCCAACC AGGGCGTGTT CTTCGCCATG CTCAAGCCGG GCGACACCAT CATGGGCATG
AGCCTGGCCG AAGGCGGCCA CCTGACGCAC GGCATGGCGC TCAACATGAG CGGCAAGTGG
TTCAACGTCG TCAGCTACGG CCTGAACGCG CAGGAAGACA TCGACTACGA TGCCCTCGAA
GCGCTGGCAC AAGAGAAGAA GCCCAAGCTG ATCATCGCCG GCGCCTCCGC GTTTGCGCTG
CGCATCGACT TCGAGCGCAT CGCCAAGGTG GCCAAGGCCG TCGGCGCGTA CTTCATGGTT
GACATGGCCC ACTACGCCGG CCTGATCGCC GCGGGCGTCT ACCCGAACCC GGTGCCGCAC
GCCGATTTCG TGACCACCAC CACCCACAAG AGCCTGCGCG GCCCGCGCGG CGGCGTGATC
CTGATGAAGG CCGAGCACGA GAAGGCCATC AACTCGGCGA TCTTCCCCGG CATCCAGGGC
GGCCCGCTGA TGCACGTGAT CGCCGGCAAG GCGGTGGCGT TCAAGGAAGC CCAGTCGCCC
ACGTTCAAGG CCTACCAGGA ACAGGTGGTG AAAAACGCCC GCGCCATGGC CGAAACGCTG
ATGGCCCGCG GCCTGCGCAT CGTCTCCGGC CGCACCGAAA GCCACGTGAT GCTGGTCGAC
CTGCGCGCGA AGAGCATTAC CGGCAAGGAA GCCGAGAAGG TGCTGGGCGA CGCGCATATC
ACCGTCAACA AAAACGCCAT CCCGAACGAT CCGGAGAAGC CCTTCGTGAC CTCGGGCATC
CGCCTGGGCT CGCCGGCCAT GACCACGCGA GGCTTCAAGG AGGGTGAGGC CGTGAAGGTA
GCCCACCTGA TCGCCGATGT GCTTGATAAT CCGCATGACG AAGCCAACAT CGCGGCCGTG
CGCGCCAAGG TGGCCGAGCT GACCAAGCAG TTCCCGGTCT ACGCATGA
|
|---|
| Protein sequence | MFERNRYTID QIDPEVFAAI QQENQRQEDH IELIASENYT SPAVMAAQGS QLTNKYAEGY
PGKRYYGGCE YVDVVEQLAI DRVKQLFGAE AANVQPNSGS QANQGVFFAM LKPGDTIMGM
SLAEGGHLTH GMALNMSGKW FNVVSYGLNA QEDIDYDALE ALAQEKKPKL IIAGASAFAL
RIDFERIAKV AKAVGAYFMV DMAHYAGLIA AGVYPNPVPH ADFVTTTTHK SLRGPRGGVI
LMKAEHEKAI NSAIFPGIQG GPLMHVIAGK AVAFKEAQSP TFKAYQEQVV KNARAMAETL
MARGLRIVSG RTESHVMLVD LRAKSITGKE AEKVLGDAHI TVNKNAIPND PEKPFVTSGI
RLGSPAMTTR GFKEGEAVKV AHLIADVLDN PHDEANIAAV RAKVAELTKQ FPVYA
|
|---|
| |