| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0722 |
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| Symbol | |
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| ID | 1219528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 768387 |
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| End bp | 768998 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637237082 |
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| Product | putative type 4 fimbrial pilin related transmembrane protein |
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| Protein accession | NP_518843 |
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| Protein GI | 17545441 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.905296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGCG ATAGCCTCTC TTTTCGCCGC CGGTCCGCGC GGGGTTTCAC GCTGCTCGAA
CTGATGGTGA CGATCGCCAT CATCTCGATC ATGCTGGTAC TGGTTGCGCC GAGCTTCAGC
GACTTCCTGC GCAAGCAGCG ACTGCTGAGC GCCGCGGACA GCGTCGCCTC CGCCATCGGC
CAAGCGCGCA CGCGTGCCCT GGCGCAGAGC GCGTATGTGA CGATCGCCCC GATCAATGGG
GACTGGGCGA ACGGCTGGCG GGTGTTCTCG GAAGGGCAAA ACCCGGACGG GATCTACAAC
CCCTCGACCG ACACGCTGCT CAACCAGTAC GACGCGCTCA CCAACGGGCT GAAGGTGACA
TACAACAGTA CCGCCTACGT CGGCGGTAGC GGCAACGCTT CGGGCAACTA CCTGATCTAT
TCGCCCAACG GCTATACCGC CAGCAAGATC AAGCAGCCGC AGGTCACTGC CGCATTCAAC
GTTGCGTACC AGGACGGCAC CGGCCCGGCA CGCATCATCA TCGTCAATGC CCTCGGCCGT
GCCAGGACGT GCGATCCGAA CGATGAGGCG ACCAAGAAAA GCGGCACCTG CCTCACCTCC
TTGTCGCAGT AG
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| Protein sequence | MRSDSLSFRR RSARGFTLLE LMVTIAIISI MLVLVAPSFS DFLRKQRLLS AADSVASAIG
QARTRALAQS AYVTIAPING DWANGWRVFS EGQNPDGIYN PSTDTLLNQY DALTNGLKVT
YNSTAYVGGS GNASGNYLIY SPNGYTASKI KQPQVTAAFN VAYQDGTGPA RIIIVNALGR
ARTCDPNDEA TKKSGTCLTS LSQ
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