| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0718 |
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| Symbol | |
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| ID | 1219524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 764641 |
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| End bp | 766482 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237078 |
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| Product | putative type 4 fimbrial biogenesis PILY1-related protein transmembrane |
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| Protein accession | NP_518839 |
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| Protein GI | 17545437 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.771675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAC GACAGACGGC CTGCGCATGG CTCTGCGCAA TGCTGCCCGG CACGGCCCAT
CCGGGCGTGA ACGATCACCC TGCCGGCCGA CTGCCGACGC ATTACCTTGT GGCCCCAGGG
GACGATGCCT GGAGCGGGCG CCTGCACGCG TTGCAGTTCC GGCCTCCGCC TGACATGCCG
GAAACCGCTC GGCCGCCGGC CATGTGGGAA GCAGCGAAGC TGCTGGATGC ACGCCAACCC
GACACCCGCC GGCTCTGGAC TTTCCGGCAA GGCGACGCCT TCGATCGCAC CGCCGTGCCG
CTGCGGTGGG AAAGCCTCGC TCCCCCGCAA CAGGAGCTGC TCAATGGCCA GGATGGCCAC
GGCATCCTCC GGCTTGGCTA CCTGCGCGGC GTGCGTCGCC ATGAAACCGA GCCACCGCAA
CTCCGTCGCC GCACGTCGAT CCTCGGTGCC GTACGTGGCG CGCATGTGCA GTTGCTCGGG
CCACCGGGCT TCGTGCTCGA TGCCCGGCAT GGCGCATTCC GCCGGCAGCA TGCCGGCCGG
CGATGGATGG TCTACCTCGG CGCCAACGAT GGCATGCTGC ATGCCTTCGA TACGCTGACC
GGCGACGAGC GCTTTGCCGT GATGCCGGAT GCCGCCCTGC CCGCCGTCGT GCGCAACATC
GCCCCCGGCC AAGCAGCACC AGCCCCCGTG TGCAAGCGCC CGTTCGCTGC CGATGCGTGG
ACCGGTGCGC AATGGCGCTC CGTGCTCGCC TGCGCCACCG GCGCGATGGC CCCTGGGCTG
TTTCTGGTCG ACGTGACCAA CCCCGACGCC GAAACGCCAC CGCCCCTGCT CGCCTATGAC
ACGCACGACG ACCCGGCGAT CGGTCATGTC GAAGACCCGG TTCCCGTCGT GCCGCTCGCC
GATGAGAGCG GCGTGCAATC GCGCTGGTTT GCGCTCAGCG GCAACGGTGA CAGTACGCCC
AGCGTGGAGA GCCGACTGCT GTTGCTGGCG CTGGACCAGC CCCGCGCGGC CCCTTGGCAA
CCGGGGCGTA CTGCGTTCGC CATCACGGTA CCCCCCGTCG CCAGCCGTGG CGGACTTGGC
GCCCCCGCTG TCGCACTGGG ACCGAACGGC CGTGCCAGCT TTGCTTATGC CGGAGATCGA
CACGGCCAGG TCTGGCGCTT CGACCTGCGC GGCGCACCGC CATGGCCACA AGCGCTGGGG
CGCAATGTCC TCGAGCGGCG ACAGCCGCTC TTTGTCGCCA CGTCGCGCAC GGGCCTACGC
CAGCGCCTTG TCGGGCCGAT CCTGCTGGCG GCGACGGCGG GCGGCCCCCT GCTGGTCTTT
GCCGCAATGG ATGCCTCAGG TGCCGCGACC GTGTATGGCG TGTCGGATGC AAGCAGCGGC
CAGCGCAACC TGGCGCGCGA ACACCTCGCC GGCCGCACAG CCTCGGAAAC GAGCGAGGGT
GTCGCCTTGC ATGCCGATGG TGGCGGCCCC ATCGGCGCAG GCTGGCGTAT CGACTTGCCC
GTCGGCCACA CCCCCGGCGA TCTCGTCAGC GCCGGACCGG ACAGCCTGCT GCTGATCGCG
CGCGACGCCG ATGGCCGCAG CCGTGCCTAT CTGCTGGATC CCCGATCGGG CCTGCCGGCC
GGCGGGAGCG TCCTGACGGG CCGCGTGCTG GCGTCCGAGC CCTTGGTCAC CGTGCATGCC
GAGCAAGCGG CCACCCAGGC CGACGGTAGC AGCACGCAAG TCGTCCAGAC CCGGCTCTGG
CAGATCGTGG AGGGCCGCAT GCAGTCCATG GAAACGCACC GCCAGCGTCG CCAATTGGGC
CGACTCAACT GGCGCGAGGT GCTCGAAGAG GGAATACGCT GA
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| Protein sequence | MMRRQTACAW LCAMLPGTAH PGVNDHPAGR LPTHYLVAPG DDAWSGRLHA LQFRPPPDMP
ETARPPAMWE AAKLLDARQP DTRRLWTFRQ GDAFDRTAVP LRWESLAPPQ QELLNGQDGH
GILRLGYLRG VRRHETEPPQ LRRRTSILGA VRGAHVQLLG PPGFVLDARH GAFRRQHAGR
RWMVYLGAND GMLHAFDTLT GDERFAVMPD AALPAVVRNI APGQAAPAPV CKRPFAADAW
TGAQWRSVLA CATGAMAPGL FLVDVTNPDA ETPPPLLAYD THDDPAIGHV EDPVPVVPLA
DESGVQSRWF ALSGNGDSTP SVESRLLLLA LDQPRAAPWQ PGRTAFAITV PPVASRGGLG
APAVALGPNG RASFAYAGDR HGQVWRFDLR GAPPWPQALG RNVLERRQPL FVATSRTGLR
QRLVGPILLA ATAGGPLLVF AAMDASGAAT VYGVSDASSG QRNLAREHLA GRTASETSEG
VALHADGGGP IGAGWRIDLP VGHTPGDLVS AGPDSLLLIA RDADGRSRAY LLDPRSGLPA
GGSVLTGRVL ASEPLVTVHA EQAATQADGS STQVVQTRLW QIVEGRMQSM ETHRQRRQLG
RLNWREVLEE GIR
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