| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0716 |
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| Symbol | |
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| ID | 1219522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 763653 |
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| End bp | 764213 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237076 |
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| Product | putative type 4 fimbrial pilin related transmembrane protein |
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| Protein accession | NP_518837 |
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| Protein GI | 17545435 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCG TTGCCTGGCA AGCCGGCGTG ACGCTGGCGG AACTGACGAT GGTGCTCGCG
ATCCTGGCAA TCCTCGCGGT ATTTGCCATG CCGGCCGGGC TGGACTGGTG GCGGCGCGAA
ACAGTGATCG TATTGGCCGA TCGCTTCGCC AGCGCGGCAT CGCTGGCACG GGCCACGGCG
CGCAACCGGC GCATCTGGGT TCATCTGGGG CCGCGCGAGG CCGCGTCGGG CTGGTCAGCC
GGATGGGCGC TATACACGAC CGCCTCGCCT CGGACGTGGG CCGCGCGCAC CGCACCGGAC
ACGGACGACG TGCTGATCGC CGTGTCCCCG CCCGTTGTGC CATCGGTCGA TTTTGCGTTC
ATCTCCTCGC AAAAGGGCGT CGACACCATT TCCTACGCAC CTGTGGGATA CTCACGGACA
AGCAACGGCG CGCCGCTGTC CGGCACGCTG ACCATCGCAT CCGGAGCGCA TGTGCGCCGC
GTGCGCATCA ACTTCGCCGG CCGGGTGCGC GTGTGCAACC CGGCCACCGA CCGCAGCTGC
GGTACCGGCG ACGATTCCTG A
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| Protein sequence | MTRVAWQAGV TLAELTMVLA ILAILAVFAM PAGLDWWRRE TVIVLADRFA SAASLARATA
RNRRIWVHLG PREAASGWSA GWALYTTASP RTWAARTAPD TDDVLIAVSP PVVPSVDFAF
ISSQKGVDTI SYAPVGYSRT SNGAPLSGTL TIASGAHVRR VRINFAGRVR VCNPATDRSC
GTGDDS
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