| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0714 |
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| Symbol | ribE |
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| ID | 1219520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 761850 |
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| End bp | 762503 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237074 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | NP_518835 |
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| Protein GI | 17545433 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.854328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTACCG GAATCGTCGC CGCCATCGGC CGCATTGAAA CCGTCGAGCC GCTCGCCGCC
GACGCACAGG CCGGCGTGCG CCTGGGCATC CATGCGGGCG GCCTGCCGCT GGCCGATGTG
GCGCTCGGCG ACTCGATCGC CATCCAGGGC GCCTGCATGA CGGTCGTCGC CAAGAACGAC
ACCCACTTCG ACGTGGACGT CTCGCGCGAA TCGCTGTCCA AGACGGTCGG CCTGGACCGC
CCGGGCGAAG TCAACCTGGA AAAGGCATTG CGCCTGGCCG ACCACATCGG CGGGCACCTG
GTCTCGGGCC ACGTGGACGG CCTGGGCACC GTCAGCCATT TCGCGCCGGT GGGCGAGTCA
TACGAACTGC GGGTGCGCAC CTCGCCGGAA CTCGGCCGCT ACTTCGCCTA CAAGGGCTCG
GTGGTGGTCA ACGGCGTGTC GCTGACGGTC AACAGCGTGC GCGACGATGC CACCGGCTGC
GAGTTCTCGA TCAACCTGAT CCCGCACACG CTGGCCGTCA CCACGCTCAA GCATCTGGCG
GTGGGCGGCC AGGTCAATCT GGAAATCGAC CTGATCGCCC GCTACGTCGA GCGGATGCTG
ACCCATACGG CGACCGGCCT GCCTGCCGCG GCCCGTCCGC TGGCCGCCGT TTGA
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| Protein sequence | MFTGIVAAIG RIETVEPLAA DAQAGVRLGI HAGGLPLADV ALGDSIAIQG ACMTVVAKND
THFDVDVSRE SLSKTVGLDR PGEVNLEKAL RLADHIGGHL VSGHVDGLGT VSHFAPVGES
YELRVRTSPE LGRYFAYKGS VVVNGVSLTV NSVRDDATGC EFSINLIPHT LAVTTLKHLA
VGGQVNLEID LIARYVERML THTATGLPAA ARPLAAV
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