Gene RSc0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0704 
Symbol 
ID1219510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp751671 
End bp752420 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID637237064 
Producthypothetical protein 
Protein accessionNP_518825 
Protein GI17545423 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.195549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGC CTTTCACCAT AGCCGCCGCC CAATCCGTTT CCGCCGCCGG CGATGTGCGA 
GGAAACGTCG GCCGGCATCT GGCCTTCCTG CACGAAGCCG CGGCCAGGCA TGTGCGCCTT
GTCGTCTTTC CCGAGCTCTC GCTCACCGGA TACGAAAGCG CGATCGCACA CGAAGTCGCA
ATGCACGCCA ACGATGCTCG CCTCGCTCCC CTGCAGGATG CATGCGTCCG AAACGGGCTG
GCCGCCGTCG TCGGCGCGCC ATTGCGCTTT GACGATGGCG TGCGGATCGG CGCACTAACG
CTGATGCCGG ACGGCAAGGT GGTGACCTAC ACGAAACGGC ACCTGCATCC GGGAGAAGGC
GCTGTCTTCA CAGCCGGAGC GGGCGGGCCG CCCATTTCGG TCGACGGCCA AACCATCGCT
CTCGCGATCT GCGCGGACAC CACCCATCCC GAGCACGCTG AACAGGCGTC CGGTATCGGA
GCGGTCTTGT ACACGGCGAG CGCGTTGATC ACAGCAAAGG GCTACGCCAC GGATACCGCC
TTGCTGCAGC GATACGCGAT GCAGCACCGC TTCGGCGTTC TGATGGCGAA CCACGGCGCG
AACACCGGCG GCTGGTCGCC GATCGGCAGG AGTGCGTTTT GGGACGAGAA CGGCCGCTGT
GTCATTGCCG CCGATGGGCT CGGCCCGGCG CTGGTGATCG CGAACAGGAC TGGCGTCGGT
TGGCGGGGTG AGGTTGTTTT GTTGGGGTGA
 
Protein sequence
MSQPFTIAAA QSVSAAGDVR GNVGRHLAFL HEAAARHVRL VVFPELSLTG YESAIAHEVA 
MHANDARLAP LQDACVRNGL AAVVGAPLRF DDGVRIGALT LMPDGKVVTY TKRHLHPGEG
AVFTAGAGGP PISVDGQTIA LAICADTTHP EHAEQASGIG AVLYTASALI TAKGYATDTA
LLQRYAMQHR FGVLMANHGA NTGGWSPIGR SAFWDENGRC VIAADGLGPA LVIANRTGVG
WRGEVVLLG