Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0704 |
Symbol | |
ID | 1219510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 751671 |
End bp | 752420 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637237064 |
Product | hypothetical protein |
Protein accession | NP_518825 |
Protein GI | 17545423 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.195549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAGC CTTTCACCAT AGCCGCCGCC CAATCCGTTT CCGCCGCCGG CGATGTGCGA GGAAACGTCG GCCGGCATCT GGCCTTCCTG CACGAAGCCG CGGCCAGGCA TGTGCGCCTT GTCGTCTTTC CCGAGCTCTC GCTCACCGGA TACGAAAGCG CGATCGCACA CGAAGTCGCA ATGCACGCCA ACGATGCTCG CCTCGCTCCC CTGCAGGATG CATGCGTCCG AAACGGGCTG GCCGCCGTCG TCGGCGCGCC ATTGCGCTTT GACGATGGCG TGCGGATCGG CGCACTAACG CTGATGCCGG ACGGCAAGGT GGTGACCTAC ACGAAACGGC ACCTGCATCC GGGAGAAGGC GCTGTCTTCA CAGCCGGAGC GGGCGGGCCG CCCATTTCGG TCGACGGCCA AACCATCGCT CTCGCGATCT GCGCGGACAC CACCCATCCC GAGCACGCTG AACAGGCGTC CGGTATCGGA GCGGTCTTGT ACACGGCGAG CGCGTTGATC ACAGCAAAGG GCTACGCCAC GGATACCGCC TTGCTGCAGC GATACGCGAT GCAGCACCGC TTCGGCGTTC TGATGGCGAA CCACGGCGCG AACACCGGCG GCTGGTCGCC GATCGGCAGG AGTGCGTTTT GGGACGAGAA CGGCCGCTGT GTCATTGCCG CCGATGGGCT CGGCCCGGCG CTGGTGATCG CGAACAGGAC TGGCGTCGGT TGGCGGGGTG AGGTTGTTTT GTTGGGGTGA
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Protein sequence | MSQPFTIAAA QSVSAAGDVR GNVGRHLAFL HEAAARHVRL VVFPELSLTG YESAIAHEVA MHANDARLAP LQDACVRNGL AAVVGAPLRF DDGVRIGALT LMPDGKVVTY TKRHLHPGEG AVFTAGAGGP PISVDGQTIA LAICADTTHP EHAEQASGIG AVLYTASALI TAKGYATDTA LLQRYAMQHR FGVLMANHGA NTGGWSPIGR SAFWDENGRC VIAADGLGPA LVIANRTGVG WRGEVVLLG
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