Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0702 |
Symbol | |
ID | 1219507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 749280 |
End bp | 750392 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637237061 |
Product | putative NADH-dependent flavin oxidoreductase protein |
Protein accession | NP_518823 |
Protein GI | 17545421 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00458318 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC TCTTCCAGCC TTTTTCCCTG CGCGGGCTTC GGCTCGACAA CCGCATCGTC ATTTCGCCGA TGTGCCAGTA CTCGGCCGAC CAGGGCCAGG CCACGGCATG GCACCAGACG CATCTGGGCG CGCTGTCGCT GTCGGGGGCG GCGCTGCTGA TGATCGAGGC GACGGCCGTG TCGCCGGAGG GGCGCATCAC GCCCGGCTGT CTCGGGTTGT GGGACGACGC CACCGAAGCG GCGCTGGCCG GGGCGCTGGC CGCCATCCGC CCGCATGCGC AGACACCGAT CGGCATCCAG ATCGCGCACG CGGGGCGCAA GGCGTCGAGC GCGCGGCCGT GGGAGGGTGG GGCACTGCTG CCGCCGGAGT CGGGCGGCTG GGAGACCATC GGCCCTTCCG CGTTGCCGCA GCGCCCGGAG GAGCGGCCGC CGCGCACCAT GACCGAGGCT GATCTCGCGC GCGTGCGCGA GGCCTTCGCC GCCACCGCGC GGCGGGCCGT CGGCCTGGGG CTGGCCGCGA TCGAACTGCA CGCCGCGCAC GGCTATCTGC TGCATGAATT CCTGTCGCCC CTGGCCAACC AGCGCACCGA CGCCTACGGC GGCTCGCGCG AGAACCGCAT GCGCTATCCG CTGGAAGTGT TCGAGGCGGT GCGCGCGGCG GTGCCGGATG ACATTCCGGT CGGCGTGCGC GTGTCGTGCA CCGACTGGGT CGAGGGCGGC TGGACGCTGG CGGATTCCGT CGCCTTCGCG CAGGCGCTGC GCGCGCGTGG CTGCGATTGG GTGGATGCGT CGTCGGGCGG TGTGTCGCCG CTGCAGCAGA TTCCGCTGTC CAGCGGGTAC CAGGTGCCGT TTGCCGACAC CATCCGGCAC CAGGCCGGCA TTCCCACGAT CGCGGTCGGG CTGATCAACG AGCCGCACGA GGCCGAGGCC ATCCTTGCCG AAGGTCGCGC CGACCTCGTG GCGATGGGCC GCGCCTTCCT CTACAACCCG CACTGGGCCT GGACGGCCGC AGCCGACCTG GGTGCGACGA TCAAGGCGCC GCCGCAGTAC TGGCGCGCGT TTCCGCGCCA CGCCAAGAAC CTGTTCGGCG AGACGCATTT CGGCGCCCGA TAA
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Protein sequence | MSALFQPFSL RGLRLDNRIV ISPMCQYSAD QGQATAWHQT HLGALSLSGA ALLMIEATAV SPEGRITPGC LGLWDDATEA ALAGALAAIR PHAQTPIGIQ IAHAGRKASS ARPWEGGALL PPESGGWETI GPSALPQRPE ERPPRTMTEA DLARVREAFA ATARRAVGLG LAAIELHAAH GYLLHEFLSP LANQRTDAYG GSRENRMRYP LEVFEAVRAA VPDDIPVGVR VSCTDWVEGG WTLADSVAFA QALRARGCDW VDASSGGVSP LQQIPLSSGY QVPFADTIRH QAGIPTIAVG LINEPHEAEA ILAEGRADLV AMGRAFLYNP HWAWTAAADL GATIKAPPQY WRAFPRHAKN LFGETHFGAR
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