Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0701 |
Symbol | uppP |
ID | 1219506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 748286 |
End bp | 749167 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237060 |
Product | undecaprenyl pyrophosphate phosphatase |
Protein accession | NP_518822 |
Protein GI | 17545420 |
COG category | [V] Defense mechanisms |
COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0205173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG CACTCGCCAT CAAAGCGCTG ATTCTCGGCA TCGTCGAAGG GCTGACCGAG TTCCTGCCCA TCTCCAGCAC CGGCCACCTG ATCCTGGCCG GGCAACTGCT CGACTTCAAC GACGAGAAGG GCAAGATCTT CGAGATCGTG ATCCAGTTCG GCGCCATCCT GGCGGTGTGC TGGGAGTTCC GCCACAAGAT CATCGACGTG ATCAAGGGCC TGCCCAACGA CCCGCGCCAG CAGCGCTTCG CCCTCAACGT GATCGTGGCG ACGATTCCGG CCATCACGCT CGCGCTGATC TTCGGCAAGG CGATCAAGGC GCATCTGTTC AATCCGATCG TGGTGGCGTC GGCCTTCATC ATCGGCGGTC TGGTGATCCT GTGGGCGGAA TGGCGCGAGC GCCATCGCGG CCAGACGCAC GATCCGCGCG GCAACGCGCT GCTGGAGGCC GCCAAGGCCG GCGCGCCGCG CGTCGAGACG CTGGATGACC TGCGCCTTTC CGATGCCTTC AAGGTGGGCC TCGCGCAGTG CTTCGCGCTG ATTCCCGGCA CCTCGCGCTC GGGCTCGACC ATCATCGGCG GCCTGCTGTT CGGCCTGTCG CGCAAGGTGG CGACGGAGTT CTCGTTCTTC CTGGCGATTC CCGTGATCTT CGGCGCGACG GTCTACGAGC TGTACAAGGA GCGCGCGCTG CTGTCGACGG ATGATCTGTC GATCTTCGGC ATCGGTTTCG TGGCGGCATT CATTTCGGCG TTCTTCTGCG TGCGCTGGCT GCTGCGCTTC ATCGCCTCGC ACGATTTCCG CGGCTTTGCG TGGTACCGGA TCGTGTTCGG CGTCATCGTG CTGGTGACGG CCTACACGCA TCTCATCGCC TGGCAGGCCT AA
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Protein sequence | MDIALAIKAL ILGIVEGLTE FLPISSTGHL ILAGQLLDFN DEKGKIFEIV IQFGAILAVC WEFRHKIIDV IKGLPNDPRQ QRFALNVIVA TIPAITLALI FGKAIKAHLF NPIVVASAFI IGGLVILWAE WRERHRGQTH DPRGNALLEA AKAGAPRVET LDDLRLSDAF KVGLAQCFAL IPGTSRSGST IIGGLLFGLS RKVATEFSFF LAIPVIFGAT VYELYKERAL LSTDDLSIFG IGFVAAFISA FFCVRWLLRF IASHDFRGFA WYRIVFGVIV LVTAYTHLIA WQA
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