| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0693 |
|---|
| Symbol | kdtA |
|---|
| ID | 1219498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 741613 |
|---|
| End bp | 742929 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637237052 |
|---|
| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| Protein accession | NP_518814 |
|---|
| Protein GI | 17545412 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0235094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCA TTGCCTATCG CCTGCTGTGG CGTGCGCTGC TGCCGTTTGC GCTGCTGCGC
CTGTGGTGGC GCGGCCGCAA GGAACCCGGC TATCGCCAGC ACGTGGGCGA GCGGCTGGGC
TTCTATCGGC CGCGCGCCAA TCCCGATCAC CCGCTGCTGT GGGTGCATGC GGTGTCGGTC
GGCGAGACGC GCGCGGCGCA GCCGCTGATC GATGCGCTGC TGGCGCGCTT CCCGCAGCAC
GACGTGCTGC TGACCCACAT GACACCGACC GGCCGCCGCA CGGGTGCCGA ATTCGCGGCA
CAGCGCAACG GCCGCGTGAT CCAGGCCTAT CTGCCCTACG ATCTGGCGGG TGCCGTCGAC
CGCTTCCTCC GCCATTTCCA GCCGCGCCTC GGCCTGCTGA TGGAGACCGA GATCTGGCCG
GTGCTGATCG AACGTGCCCA CCATGCCGGC GTGCCGATGG TGCTGGTCAA TGGGCGGCTG
TCCGAGCGCA GTCATCGGCG CACCGCACGG CTGGGCCAGG CCGCGCGCGA GACCTATGCG
CAGCTCGCCG CGGTGCTCGC CCAGACCCCG GACGACGCCG ACCGCTATCG TTCGCTCGGC
GTGCCGCGCG TGCGCGTGAC CGGCAACCTG AAGTTCGATA TCACGCCGCA TGTCGACCAG
ATCATGATGG GCCGTGCGTT GCGCGATGCG TTGGGCGGGC GCGCCGTCTG GGTGGCCGCC
AGCACGCGCG AAGGCGAGGA GCCCCTGCTG CTCGATGCGT GGCATGCGCA TCGCGCGCAG
CATGCGGGCC GCCGGCATCC GCTGCTGATC CTGGTGCCGC GCCATCCCCA GCGCTTTGAC
GAAGTGGCGC AGCTCGCGGG GCTCAAGGGC TTGCGCGTCG CGCGTCGCAG TGCCCTGTCG
CTGTCGGCGG CCGAAGCGCC CGATGCGGCC GGTGTGCTGG ATGCGGACAT CCTGCTGGGC
GATTCGATGG GCGAAATGGC GCTGTACTAT GCCGCCGCAC AGGCCGCATT CATCGGCGGC
AGCCTGCTGC CGATGGGCGG ACAGAACCTG ATCGAGGCCT GTGCGGTCGG GACCCCCGTC
GTGATCGGTC CGCATACCTT CAATTTCGCG CAGGCCACGC GCGATGCCGT GGCGGCGGGC
GCATGCGTGC AGGTGGAGGA TGCCGCCTGC GCCGTGCGCG TGATCGACCA GTGGCTGTCC
GATGCCGATG CGCGCGAGGC CGCATCGCGT GCCGCGCTGG CATTCGCCGC GACCCACGGC
GGCGCCACGG CACGCACGGT GGAGGCGGTG GCGTCGCTGG TGCTGCCGTC GCTCTAG
|
|---|
| Protein sequence | MLRIAYRLLW RALLPFALLR LWWRGRKEPG YRQHVGERLG FYRPRANPDH PLLWVHAVSV
GETRAAQPLI DALLARFPQH DVLLTHMTPT GRRTGAEFAA QRNGRVIQAY LPYDLAGAVD
RFLRHFQPRL GLLMETEIWP VLIERAHHAG VPMVLVNGRL SERSHRRTAR LGQAARETYA
QLAAVLAQTP DDADRYRSLG VPRVRVTGNL KFDITPHVDQ IMMGRALRDA LGGRAVWVAA
STREGEEPLL LDAWHAHRAQ HAGRRHPLLI LVPRHPQRFD EVAQLAGLKG LRVARRSALS
LSAAEAPDAA GVLDADILLG DSMGEMALYY AAAQAAFIGG SLLPMGGQNL IEACAVGTPV
VIGPHTFNFA QATRDAVAAG ACVQVEDAAC AVRVIDQWLS DADAREAASR AALAFAATHG
GATARTVEAV ASLVLPSL
|
|---|
| |