Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0685 |
Symbol | rfbC |
ID | 1219490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 732998 |
End bp | 733549 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237044 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase protein |
Protein accession | NP_518806 |
Protein GI | 17545404 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGA ACGTCGTTCC CACCGCCATT CCGGAGGTCC TGATCCTCGA GCCGAAAGTG TTTGGCGACG ACCGGGGCTT CTTCTTCGAG AGCTTCAACG CGCGTGCCTT CGAGCAGGTC ACGGGCGTCA AGCGGACCTT CGTTCAGGAC AACCATTCGC GCTCGGCCCG CAATGTGCTG CGCGGCTTGC ACTACCAGAT CCAGCATCCG CAGGGAAAGC TGGTGCGCGT GACGGTCGGT GAAGTCTTCG ATGTCGCGGT CGATCTGCGC AAGCGCTCGC CGACCTTCGG CAAGTGGGTC GGCGTGACGC TGTCGGCGGA GAACAAGCGC CAGCTGTGGG TGCCGGAAGG GTTTGCGCAT GGCTTTGTCG TGACCTCCGA CCACGCCGAG TTCCTGTACA AGACCACCGA CTACTGGTAC GCCGAACACG AGCGCAGCAT CGTCTGGAAC GACCCGGACC TCGGCATCGA GTGGCCGGTC CAGGGCACGC CGGTCCTGGC GGCGAAAGAT GCCGCCGGCG CGCGGTTTGC CAGCGCGGAC TTGTTCGACT GA
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Protein sequence | MNLNVVPTAI PEVLILEPKV FGDDRGFFFE SFNARAFEQV TGVKRTFVQD NHSRSARNVL RGLHYQIQHP QGKLVRVTVG EVFDVAVDLR KRSPTFGKWV GVTLSAENKR QLWVPEGFAH GFVVTSDHAE FLYKTTDYWY AEHERSIVWN DPDLGIEWPV QGTPVLAAKD AAGARFASAD LFD
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