Gene RSc0682 details

Gene Information

• Locus tag: RSc0682
• Symbol: rfbB
• ID: 1219487
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 730141
• End bp: 731205
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637237041
• Product: dTDP-glucose 4,6-dehydratase protein
• Protein accession: NP_518803
• Protein GI: 17545401
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1088] dTDP-D-glucose 4,6-dehydratase
• TIGRFAM ID: [TIGR01181] dTDP-glucose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGTCCCATA TCCTCGTAAC CGGTGGCGCC GGCTTCATCG GCGGCAACTT TGTCCTGAAC 
TGGCTGGCCA ATCCTGGCGC GGACGGCGTT GTCAACGTCG ATAAGCTGAC CTACGCCGGC 
AATCGCAAGA CGCTGGCCGC CATCGAGCAT GACCCGCGCC ACATCTTCTC CCAGACGGAT 
ATCTGCGACC GTGCGGCGCT CGACAGCCTG TTCGCCCAGC ACAAGCCGCG CGCGGTGGTC 
CACTTCGCCG CGGAGAGCCA CGTGGATCGC TCCATCCACG GCCCGGCCGA ATTCATCCAG 
ACCAACATCG TCGGCACCTT CACGCTGCTG GAAGCCGTGC GCGCCTACTG GGGCGGGCTC 
GATGCCGACG CCAAGGCCGC GTTCCGCTTC CTGCACGTCT CGACCGACGA GGTTTTCGGC 
TCGCTCAGCG CCACCGATCC GCAATTCTCG GAAACCACGC CGTACGCGCC CAACAGCCCG 
TACTCGGCAT CCAAGGCCGC CTCGGATCAC CTGGTGCGCG CTTATCACCA CACCTACGGG 
CTGCCGGTCC TGACGACCAA CTGCTCCAAC AACTACGGCC CCTACCATTT CCCGGAAAAG 
CTGATTCCGC TGATGATCAC CAATGCACTC AGCGGCAAGC CGCTGCCGGT GTACGGTGAT 
GGGCAGAACG TGCGCGACTG GCTCTACGTG GGCGACCACT GCGCCGCCAT CCGCGAGGTG 
CTTGCGCGTG GCCGTCTGGG CGAGACCTAC AACGTCGGCG GCTGGAACGA GAAGACCAAC 
CTCGAGGTCG TGTACACGCT GTGCGACCTG CTCGACGAAC TGAAGCCGAA GGCAACGGGC 
TCCTACCGCG ACCAGATCGC GTTCGTGAAA GACCGGCCGG GCCACGACCG CCGCTACGCC 
ATCGACGCCC GCAAGCTCGA GCGCGAACTC GGCTGGAAAC CCGCCGAGAC CTTCGAGACC 
GGCCTGCGCA AGACCGTCCA GTGGTACCTG GACAATCAGG TGTGGGTGCA GGACGTGGTC 
TCGGGCGAAT ACCGGAACTG GGTCGCGAAG CAGTATGCAG CATAA 

 

Protein sequence

MSHILVTGGA GFIGGNFVLN WLANPGADGV VNVDKLTYAG NRKTLAAIEH DPRHIFSQTD 
ICDRAALDSL FAQHKPRAVV HFAAESHVDR SIHGPAEFIQ TNIVGTFTLL EAVRAYWGGL 
DADAKAAFRF LHVSTDEVFG SLSATDPQFS ETTPYAPNSP YSASKAASDH LVRAYHHTYG 
LPVLTTNCSN NYGPYHFPEK LIPLMITNAL SGKPLPVYGD GQNVRDWLYV GDHCAAIREV 
LARGRLGETY NVGGWNEKTN LEVVYTLCDL LDELKPKATG SYRDQIAFVK DRPGHDRRYA 
IDARKLEREL GWKPAETFET GLRKTVQWYL DNQVWVQDVV SGEYRNWVAK QYAA