Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0675 |
Symbol | |
ID | 1219480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 724420 |
End bp | 724992 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237034 |
Product | hypothetical protein |
Protein accession | NP_518796 |
Protein GI | 17545394 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCGC CGGACGCACC CATCAATCTC ACGAATCAGT TCCTGATCGC TATGCCCGGC ATGGCGGATC CCACGTTTTC GGGTACGGTC GTGTACCTGT GCGAGCACAA TGAGCGGGGT GCGCTCGGTC TCGTCATCAA TCGGCCCATC GATATCGATC TGGCGACCCT GTTCGACAAG ATCGACCTCA AGCTGGAAAT CCATCCCCTT GCCGAACAGC CTGTCTACTA CGGCGGCCCG GTGCAGACCG AGCGTGGCTT TGTGCTGCAC GACGCCATGG GCTCGTATTC GTCGTCGCTG ACGGTGCCGG GCGGGCTGGA GATGACCACC TCCAAGGATG TGCTGGAGGC CGTCGCCCGG GGTGGCGGAC CACAACGCTT CATCCTGACC CTCGGCTATG CGGGCTGGAG CGCCGGCCAG CTGGAAGAGG AGATCGGCCG CAATGGCTGG CTGACCGTCC AGGCCGATCC CGAGATCATC TTCAATGTAC CGGCCGAGGA GCGCTTTGCC GCCGCGCTGA GACTGCTCGG CATCAATCCC GCCATGCTCT CCGGTGAGGC CGGGCATGCC TGA
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Protein sequence | MASPDAPINL TNQFLIAMPG MADPTFSGTV VYLCEHNERG ALGLVINRPI DIDLATLFDK IDLKLEIHPL AEQPVYYGGP VQTERGFVLH DAMGSYSSSL TVPGGLEMTT SKDVLEAVAR GGGPQRFILT LGYAGWSAGQ LEEEIGRNGW LTVQADPEII FNVPAEERFA AALRLLGINP AMLSGEAGHA
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