| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0672 |
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| Symbol | |
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| ID | 1219477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 717024 |
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| End bp | 723170 |
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| Gene Length | 6147 bp |
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| Protein Length | 2048 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637237031 |
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| Product | putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein |
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| Protein accession | NP_518793 |
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| Protein GI | 17545391 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.843202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCATC CATCTTCCGC CCAGCCCGAA TCCGCCTCCC TCGAGGCGGC CGGGGCCGTC
GCTGCGGCGC GTCCTGTTCC TTCCGCGCCG GCGCGCGATC TGTCCGCGCT GGCCTGGGTT
GCGCCCAACA TGCGCGCCGC GCTGGACGAC GCGGTCCGCG AATTCCGTGA ATACGTTGCC
GATGTGGTGG CCAACCCCGA GGTGCTCGGG GCACGCGACA CCACCTCGCT GCGCTTGGCC
GGCCAATATC TGCACCAGGC CGCCGGCGCA CTGCTGATCG TCGGCCTGCG CGGCATCGAT
GTGTACTGCC AGGCCGCCAA GCGCCTGCTG GAAGCCGTCG ATGCGGGTAC GCTGGTCGCC
GATGCGCAGA CCCTGGACAT CTTCTCGCGC GCCGTGCAGG CGCTGCAGGA GTATGTCGCC
GACCTGATGG CCGGCATGGC CGAAGAGCCG CTGCGCCTGT TCCAGCCCTA TCAGGCCGTG
CTCGCCCGCC TGGGCGAAGA GCGCATCCAT CCCGCCGACC TGTGGGCCGA CGAACTGCGC
CACCTGCCGG CGCTGCTGCT GCCTTCGCGC GATCTGGTGG GCCTGTCGCG CCTGCGCCGT
AAATTCGAAA TGGCGCTGCT GGCCGCGCTG CGCCTGCCGA ACACGGCCGG CCCCGAACAC
GATCCCGCCG TCGCCGCTGC CGCCTATGCG CCGATGGAAA AGCTGCTGCA CGGCATCCGC
GCGCTCGAGC GCGAGCCGCG CCGCACCGGC GACGACCTGC TGCGCGACTT GTGGCTGGTG
CTCGCGCTGA CCTTCGGCGC GCTGCGCGCC GGACTGGTTC CGGCCGACAT CACCGGCAAG
CGCCTGGCCG CGCGCGTCAA CCTGCTGCTG CGCCAGTATT CGCACAACAA CGTTCACCTG
CCGCAAGGGC TGCTGACCGA CGCGCTCTAC CTGCTGGCCG GCATGGCCTA CGGCAACGCC
CTCGGCGCGC CGGTCGGGGA CGACACGCTG GGTTCGGACA TCATCGCCTG CGTGCAGGCC
TTCTCGATTC CCGCCACGCA TGCGCCGGCC AACGCGCTGC ACACCCATCA CTATTACGCG
CTGTTGTCGG CCGAGATGAC CGACACGCTG CAGCGGATCG GCCGCACGCT CGAAACGCTG
AGCCAGCAGC CCGCTCCCGT TGCCGACGAG CTCGATACCG CGCTGCAGAC GCTGGCGCTG
CACGCCGATG CGCTCGGCCA GCCGGCGCTG TCCGCTCTGA CCCATCGCCT GGGCGAGCCG
GCCGACGTGC CCAGCCAAGA CGCGGCGCCG ACGCTGCTGT TTCTCTCGCG CATGCTGGCG
CGTCCCTGGG CGCTGCACGG CGAATCGGGC GATCTGCGCA GCGCCTGGTT TGCCGCCCGC
TGCAACGAGC TGGCCGAACA CGTGCGCGCG CAGCGCGCCG GCGAGCAGGC GCCGGCACCG
GTCTGGCTGT CGCGGCTGAC CGATGAGATC ACGCAGCGCC GCACGCGCGG CGAGCAGGTT
CGCGCATTGC AGACGCGGCT CGCCTCTGCC GAGACGCACC TGGATGCGTT CGAGCGCGAA
GGCGATGCAA GCGGCGGCCT GAAAGAAGCC AGCCGCCTGT TCGCCGAGAT GCAGGCCACG
TTCACCTCGC TGGGCGCTGG CGAAGCGGTG CGCGCCACCG AAGCCGCGCA AGCGACCATC
GCCACGCTGG AGGCCCCCGG GCAGGCCGCC GCCGCCGACC GCGAGCACTA CCTGGCCGCG
CTGGCCGGCA ACGTCAGCGG CCTGCAGGGC TTCCTCGACG CACTGTCGGC CGGTACCGAG
CTGACCGGCG CGCAGATCGA CCAGATCGTG GTCGAGGGCG CGCTGACGTC CGTGGAGCGC
GAATCCGCCT GGCGCGACTT CGCGTTCGAT GCCGAGACCG GCATGCTGGT CCGCCGCGAA
CCCCAGGTCG ACCTCAACGC CGATGCCGCC GCCGCACAGG CGGATGCCGA CGGCGAGCAT
CTGCAATCCC TGCTGGATCG CCTGCTTGCC AAGCAGCCGG TCGACCAGGC CGATCCGCTT
GCCGCCGAAC TGCGTACCGC CCTGCACGAA GCGCGCGATG CCGCCGCCAT CGATGACGAT
CCGGCCCGCC GCCGCCGTCT GGAAGAGGCC CTGGCGCAGT TCGACGCCTG GCAGGCCGGC
AGCCAGGCCG CGCTGGAGCG CATGCAGGCC GCACTGGCGG CGCCCGCGGC CGAAGCGGCC
GTGGCGGCAG TCGCCGCGCC GGCCGCGAGC GATGCGCAGT CCATCGACGC AGAACTGCTG
GAAATCTTCC TGTTCGAAGC CGACGAGGTG CTCACCGGCG TGCGGACCGA CCTGCAGGCG
CTGCACGTCA CCGCGCAGGC GGGCTCGGGC GGTGCCGCCA CCGGTAGCGA TCTGGACCTG
CTGACGCAGC TGCGCCGCGC CTTCCATACG CTCAAGGGCT CGGGCCGCAT GGTGGGCCTG
ACGCGCTATG GCGAGGCCGC CTGGGCCATC GAACAGGTGA TGAACGTGTG GCTGGCCGAA
AGCCGCGTGC CCACGCCCGA CCTGGCCGCG CTGCTGGCGC GAGCCGAGGC GGACCTGTCG
GCGTGGACGG CCGCCATTGC GCAAGCGCCG CACGCCGATC ATGCGATCGA GCCGCTGGTG
GCGGCCGCCG ACCGCGTGCG CCACGGCGGG CCATTCGTGT GGCTGGAGGC CGTGGCCGAT
GCGCCCGCGC CGCAATCGCT GGAGGCACCG GCCGAGCCGG CGGTTTCGCC CGAACCCGCC
GCACCGGCAC CGGAACCGCG GCTGCATGTC GTGGAGCCGG TGGACACGCC CGCCGATGCC
CCTGTCGCGC CGGAAGCGCC GTTCGCGCCT GTCGAGCCTG TGCTCCAGGC CAACGACGCA
GCTTCGCTGT CGTGGGACGA TGTTCCCGTC CTCCCCGCGT CCGATGCGCT GGCAGCCGAG
GCACCGGTCC TGGCGCCGGT TTCCGAGCCG GTCGCCGAAG CCGTGACCGC GCCCGAGCCG
ATCAGCGAGC CGATGGTGGA GCCGATTGCC GAGCCGGTCG TCGAGCCTGC TGCCATCGAG
CCCGTGGCGG AAGCTGCCGC CGCCGAGCCC GCGCCGGCCG AAGCCGACGC CAAGGTGATC
CCGTTCCCGT TCGAGCAGAC CGGCACGCCG GAAGAGGCAT CGCACGACGA CGGCATCAAG
ATCATCGGCC CCGTGTACAT CAGCGTGGCG CTGTACAACG TCTACCTCCA GGAAGCCGAC
GCACTGATTC GCCGCCTGGG CGTGGATTTC TCCGAATGGC GGCACGAAGG CCGCGCCCAG
CCGAGCGAGC TGGCGCTGCG CGCCGCGCAT ACGCTGCAGG GCAGCTCCGC CGTGGTGGAG
CTCGAGCCGG TGCGCCTGAT CGCCGATGGG CTGGAGCAGG TGCTGCTGAA CCTGGACAGC
CGTCCGGTGG CGATGCATCC GGGCGACTTC CGCCTGCTCG ACCAGTCGGT CGAGCGCATG
CGCGGCATGC TGCACCAGTT TGCCGCCAGC GTCTGGCCCG AGGCCGATGA CGCGCTGTGC
CGCGGCCTGG CCGAGCTGTG CGAGCGCGTG TTGGTGCGCC CGCGCCTGCA GTCCGAAACG
GCTCCGCAGG CGCTTGCCGA TGCGGAGACG GTCGAGAACG AGAACCCGGT CATCGGCGAA
GACGACGTGC CGGCGATCGC GGCGCCGGAA AGCATCGCGC CGCTTGCGCC GGTCTACGAG
CCGCCGGTGG CGGCTGGCCC GGCGGTTGCC GAGCTGGTGC GCCAGGCGCC GTCCGATGCG
CTGGATTCGG CCCTGCTGGA AATCTTCCTG GAAGAGGCGC ACGTCGCGCT GCCCGAACTG
GGCCAGCAAC TGCGCGCGTG GGAAGCCGCG CCGCAGGACC GCACCGTCTC GGGCCTGCTG
CTGCGTAACC TGCACACCGT CAAGGGCAGT GCGCGGATGG CCGGCGCGAT GACGCTGGGC
CAGGCCGCGC ACGAAATGGA AAGCGCCGTC GACAACGGCC TGCGCCACAA CCGCGTCGAC
GAGGCGCTGT TCCGCAAGCT GTACGTCTGG CTCGACCGCA TCCAGGCCCA CGTCGACGCG
CTGGGCGCCG GCAAGCTGCT GCCGCTGGAT GCCGGCTTGC GCGACGCGCC GGAAGCGCCG
TCCGCGGCCG CCGGCGACCC GGCGTCCGCG GGTGCGATGC TGCCCGCTGT CGCCGGCGCC
ACGAGCGTCG ACCTGACCGG CGCCCGCAGC CCCGAGGCCG AGGCGCTGGA AGTCGCCGAG
CGCCAGCGCG CCATGGTGCG CGTGCAGGCA CGCGCGCTCG ATGCGCTGAT CAACGACGCC
GGCGAAGTCG GCGCGGCGCG TGCGCGTCTC GAGGCCGAGG TCCAGGCGCT CAAGAGCTAT
CTGGCCGAAC TGAACGACAA CGTGGCGCGT CTGCGCGCCC AGGTGCGCGA GATCGAAATC
CAGGCCGAAT CGCAGATGGA GTCGCGCATC GCGGATGCCG CCGCGCACTC CGAATCCTTC
GACCCGCTGG AGTTCGACCG CTTCACCCGC CTGCAGGAAC TGACGCGGAT GATGGCCGAG
TCCGTCAACG ACGTGGCGAC GGTGCAGCAG AACTTGTTCC GCGGCTTCGA TCAGGCTTCG
CTGGATCTGG AAACGCAGGC ACGCCTGACG CGCGGTCTGC AGCGCAGCCT GATGCGCGCC
CGCATGGTGC AGTTCGATAC CGTCGCCGAC CGTCTGTATC GGGTGGCGCG CCAAGCCGCC
GCGGAAACCG GCAAGGAAGT CCGCCTGTTC ATCAAGGGCG GTACGGTGGA ACTGGACCGC
AGCGTGCTGG ACCGCATGGG CGGCCCGCTC GAGCACATGA TCCGTAACGC CGTCGCGCAC
GGCATCGAGC TTGCAGAGGA GCGCCGCACC AAGGGAAAGT CTCCCGCTGG CGAGCTTACG
CTAGAAGTGC AGCAGGAAGG CAACGAGGTC GTACTTCACT TCGTCGATGA CGGCGCCGGC
CTGAACCTCG AACGCATCCG CGCCCGCGCG CTGGAGCGCC AGCTGCTGGC ACCCGACGAG
GAAGCCAGCG AGGCGCGGCT GACCGAGATG ATCTTCTCGC CCGGCTTCTC CACCGCCCAG
CAGGTGTCGG AACTGGCCGG CCGCGGCGTC GGCATGGATG TGGTGCGCGC CGAGACGGTG
GCGCTGGGTG GCCGCATCTC GCTGCAGACC ACGCCGAATG TGGGCACGCG CTTCACCATC
CACCTGCCGC TGACCACCGC CATCACGCAG GTGCTGCTGG TGCGCGTGGG CGAGCGCGTG
TACGCGATCC CCTCGGGCAT GATCGACCAC GTGCAGCAGT TGCGCCCGCA GTTGCTGGCC
GAGGCCTACA ACGCCGGCGC GCTGGAATTG CCGGGCGGCC CGGTGCCATT CCACTACTTC
GGCGCGCTGC TGGAAGAGGC CCGGCCCGTG ATGGGCGGCC GCAAGTACTC GCCGGCGGTG
GTGGTGCGCA GCGGCAACGA TCGCGCGGCC GTGCACGTGG ACGAAGTGAT CGGCAACCGC
GAAGTGGTGG TCAAGCACAT CGGTCCGCAC CTCGCGCGTC TGGAAGGCAT CGCCGGGGCG
ACCACGCTGG GCGATGGCGA AATCGTGCTG ATCTACAACC CGGTGGTGCT CACGCAGCGC
TTCGAACGCG AGGCCGCCGC GCTGGGCCTG CTGCAGGCCG AGCAGGGAAC CAAGGGCGCC
GTGGCCGAGC TGTCGCGCAA CGGCAGCACC GATGCCGTGC CCTGCCTGGC CACGCAGCCG
ATCGTGATGG TCGTCGACGA CTCGCTCACG GTGCGCAAGG TCACGCAGCG CCTGCTGACG
CGTTCCGGCT ACCAGGCCGT GCTCGCGCGC GACGGCGTGG ATGCCCTGCG GCAACTGCAG
GAAGTCACGC CGGACGCCAT GCTGGTCGAC ATCGAAATGC CGCACATGGA TGGCTTCGAT
CTGACCCGCA ACGTGCGCGC CGACGAGCGC ATCGGCGCCA TGCCGATCAT CATGATCACC
TCGCGTTCGG CGGACAAGCA CCGCCGCTAT GCCGCGGAGA TCGGCGTCAA CGTCTACCTG
GGCAAGCCCT ACAACGAAGA CGAGCTGCTG CGCCACCTGC GCAACCTGAT CGGTTCGCGG
GCACCCGCCG CCGCCAACGC GGGCTGA
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| Protein sequence | MHHPSSAQPE SASLEAAGAV AAARPVPSAP ARDLSALAWV APNMRAALDD AVREFREYVA
DVVANPEVLG ARDTTSLRLA GQYLHQAAGA LLIVGLRGID VYCQAAKRLL EAVDAGTLVA
DAQTLDIFSR AVQALQEYVA DLMAGMAEEP LRLFQPYQAV LARLGEERIH PADLWADELR
HLPALLLPSR DLVGLSRLRR KFEMALLAAL RLPNTAGPEH DPAVAAAAYA PMEKLLHGIR
ALEREPRRTG DDLLRDLWLV LALTFGALRA GLVPADITGK RLAARVNLLL RQYSHNNVHL
PQGLLTDALY LLAGMAYGNA LGAPVGDDTL GSDIIACVQA FSIPATHAPA NALHTHHYYA
LLSAEMTDTL QRIGRTLETL SQQPAPVADE LDTALQTLAL HADALGQPAL SALTHRLGEP
ADVPSQDAAP TLLFLSRMLA RPWALHGESG DLRSAWFAAR CNELAEHVRA QRAGEQAPAP
VWLSRLTDEI TQRRTRGEQV RALQTRLASA ETHLDAFERE GDASGGLKEA SRLFAEMQAT
FTSLGAGEAV RATEAAQATI ATLEAPGQAA AADREHYLAA LAGNVSGLQG FLDALSAGTE
LTGAQIDQIV VEGALTSVER ESAWRDFAFD AETGMLVRRE PQVDLNADAA AAQADADGEH
LQSLLDRLLA KQPVDQADPL AAELRTALHE ARDAAAIDDD PARRRRLEEA LAQFDAWQAG
SQAALERMQA ALAAPAAEAA VAAVAAPAAS DAQSIDAELL EIFLFEADEV LTGVRTDLQA
LHVTAQAGSG GAATGSDLDL LTQLRRAFHT LKGSGRMVGL TRYGEAAWAI EQVMNVWLAE
SRVPTPDLAA LLARAEADLS AWTAAIAQAP HADHAIEPLV AAADRVRHGG PFVWLEAVAD
APAPQSLEAP AEPAVSPEPA APAPEPRLHV VEPVDTPADA PVAPEAPFAP VEPVLQANDA
ASLSWDDVPV LPASDALAAE APVLAPVSEP VAEAVTAPEP ISEPMVEPIA EPVVEPAAIE
PVAEAAAAEP APAEADAKVI PFPFEQTGTP EEASHDDGIK IIGPVYISVA LYNVYLQEAD
ALIRRLGVDF SEWRHEGRAQ PSELALRAAH TLQGSSAVVE LEPVRLIADG LEQVLLNLDS
RPVAMHPGDF RLLDQSVERM RGMLHQFAAS VWPEADDALC RGLAELCERV LVRPRLQSET
APQALADAET VENENPVIGE DDVPAIAAPE SIAPLAPVYE PPVAAGPAVA ELVRQAPSDA
LDSALLEIFL EEAHVALPEL GQQLRAWEAA PQDRTVSGLL LRNLHTVKGS ARMAGAMTLG
QAAHEMESAV DNGLRHNRVD EALFRKLYVW LDRIQAHVDA LGAGKLLPLD AGLRDAPEAP
SAAAGDPASA GAMLPAVAGA TSVDLTGARS PEAEALEVAE RQRAMVRVQA RALDALINDA
GEVGAARARL EAEVQALKSY LAELNDNVAR LRAQVREIEI QAESQMESRI ADAAAHSESF
DPLEFDRFTR LQELTRMMAE SVNDVATVQQ NLFRGFDQAS LDLETQARLT RGLQRSLMRA
RMVQFDTVAD RLYRVARQAA AETGKEVRLF IKGGTVELDR SVLDRMGGPL EHMIRNAVAH
GIELAEERRT KGKSPAGELT LEVQQEGNEV VLHFVDDGAG LNLERIRARA LERQLLAPDE
EASEARLTEM IFSPGFSTAQ QVSELAGRGV GMDVVRAETV ALGGRISLQT TPNVGTRFTI
HLPLTTAITQ VLLVRVGERV YAIPSGMIDH VQQLRPQLLA EAYNAGALEL PGGPVPFHYF
GALLEEARPV MGGRKYSPAV VVRSGNDRAA VHVDEVIGNR EVVVKHIGPH LARLEGIAGA
TTLGDGEIVL IYNPVVLTQR FEREAAALGL LQAEQGTKGA VAELSRNGST DAVPCLATQP
IVMVVDDSLT VRKVTQRLLT RSGYQAVLAR DGVDALRQLQ EVTPDAMLVD IEMPHMDGFD
LTRNVRADER IGAMPIIMIT SRSADKHRRY AAEIGVNVYL GKPYNEDELL RHLRNLIGSR
APAAANAG
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