Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0662 |
Symbol | |
ID | 1219467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 707594 |
End bp | 708115 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637237021 |
Product | hypothetical protein |
Protein accession | NP_518783 |
Protein GI | 17545381 |
COG category | [S] Function unknown |
COG ID | [COG3762] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.505723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTA CCCGACACCA TCGCGGCGCC CGCCGCGCCC TGCGCCACCT GACGACGACC ACCGCGCACG CGCGCCGTGC CTTCTCGCCG GCCGATCTCC GTCAGCTGGA AGCCGCCGTG CGCGAGGGCG AGCGGCGGCA TCGCGGCGAA GTGCGCATCG TCATCGAAGC CTCGCTGCCG GTGCGCGACG CGTGGGCCGG CGTGACGCCG CGCCAGCGCG CCCGCACGCT GTTCGGCCTG CTGGAGGTGT GGAACACGCA CGAGCATGTC GGCGTGCTGC TCTACCTGAA CCTGGCCGAC CACGCAGTCG AAATCCTGGC CGACCGGGGG ATCGCCGCTC GCGTCGAGCC GCACGCGTGG CGCGCCATCT GCGAGACCAT CACGCACGGT TTCGCCCAGG GCGTCGCCAT CGGGCCGGTA CTCGAAGCGC TCGGACAGAT CCACGCGGTG CTCGCCGCGC ATTTCCCGTC CGACGGCGCG CCGCGCGCCA ACGAACTCGC CGACAAGCCG CTCGTGCTCT GA
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Protein sequence | MTSTRHHRGA RRALRHLTTT TAHARRAFSP ADLRQLEAAV REGERRHRGE VRIVIEASLP VRDAWAGVTP RQRARTLFGL LEVWNTHEHV GVLLYLNLAD HAVEILADRG IAARVEPHAW RAICETITHG FAQGVAIGPV LEALGQIHAV LAAHFPSDGA PRANELADKP LVL
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