Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0658 |
Symbol | |
ID | 1219463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 705602 |
End bp | 705763 |
Gene Length | 162 bp |
Protein Length | 53 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637237017 |
Product | putative pilin transmembrane protein |
Protein accession | NP_518779 |
Protein GI | 17545377 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3847] Flp pilus assembly protein, pilin Flp |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.279037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.470372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCG TAGTCCAGCG TTTCATCCGG AATGAAGACG GCGCGGCCAG CACCGAATAC GCACTGCTGG TGACCTTCGT GGCGCTGGTG ATGCTCGCCT ACGGCGATGC CCTCCAGGGC ACCGTGAAGA GTGCCTGGAG CCAGATTGCC GCGGCGTTCT AG
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Protein sequence | MNTVVQRFIR NEDGAASTEY ALLVTFVALV MLAYGDALQG TVKSAWSQIA AAF
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