Gene RSc0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0658 
Symbol 
ID1219463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp705602 
End bp705763 
Gene Length162 bp 
Protein Length53 aa 
Translation table11 
GC content62% 
IMG OID637237017 
Productputative pilin transmembrane protein 
Protein accessionNP_518779 
Protein GI17545377 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.279037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.470372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG TAGTCCAGCG TTTCATCCGG AATGAAGACG GCGCGGCCAG CACCGAATAC 
GCACTGCTGG TGACCTTCGT GGCGCTGGTG ATGCTCGCCT ACGGCGATGC CCTCCAGGGC
ACCGTGAAGA GTGCCTGGAG CCAGATTGCC GCGGCGTTCT AG
 
Protein sequence
MNTVVQRFIR NEDGAASTEY ALLVTFVALV MLAYGDALQG TVKSAWSQIA AAF