| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0650 |
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| Symbol | |
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| ID | 1219455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 696884 |
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| End bp | 697831 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237009 |
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| Product | putative tight adherence TadC-related transmembrane protein |
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| Protein accession | NP_518771 |
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| Protein GI | 17545369 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.640477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.167986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCG TACACATCGT ATTGCTGGCC GGCACCTTCG CCATCGTCTT CGGCGCGGTC
CTGGCGGCCC TGACACTGCT TCGCCCGAGC ACGCTGGACC GGCGCCTGGG CCAGATCGAC
CGCGAGCTGC CGCGCTCGCA GCCGCGCGAC GACGGCCGCG ACCGCGCGTG GCTGCGCCGG
CTCGAGCAGC TCGCCAAGCC GCTGGCCAAG GCGTCGCTGC CCAAGGAGGG CTGGGAGGGC
TCGTCGCTGC GCCAGCGCTT CGTCCATGCC GGCTGGCGGG CACCCGAGGC GATCGCGGTC
TATTTCGGCA TCAAGACGAT CCTGACCTTC GGGCTGCCGC TGCTGCTGTG GGCCGGGCTG
GTCGGCCGCT TCAACGCAGA CCAGCAGTCG CAGTTCATGA GCCTGCTGTT CGGCGCCGCG
GTGGTCGGGT TCTACCTGCC GAACGTGCTG CTGAGCCTGA AGATCAAGTA TCGGCAGCGC
GAGATCTTCG AGTCGTTCCC GGACAGCCTG GACCTGATCA TGGTGTGCGT GGAGGCGGGC
CTGAGCCTGG ATGCCGCGAT CCTGCGCGTG GTGGACGACA TGCGCACGGC ACGCCCGGTC
ATGGCCGAGG AGTACGAACT GCTGACGCTC GAGCTGCGCG CCGGCCTGTC CCGCGAAAAG
GCGCTGCGCA ACCTGGCCGC GCGCACCGGC GTGGACGACG TCAGCATGCT GGTGGCCATG
CTGATCCAGG CCGACCGCTT CGGCACCAGC GTGGCCGACT CGCTGCGGGT GCACTCCGAC
ATGCTGCGCA CCAAGCGGCA CATGCTGGCC GAGGAGCGCG CCGCGAAGAT CGGCACCAAG
GTCCTGTTCC CGCTGATCTT CTGCATCTTC CCCTCGCTCT ACGTCGTGCT GCTCGGGCCG
GCCGCGCTCC AGATGATCGC GGCGCTGGGC GCGCCCGGCG GCAACTGA
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| Protein sequence | MHTVHIVLLA GTFAIVFGAV LAALTLLRPS TLDRRLGQID RELPRSQPRD DGRDRAWLRR
LEQLAKPLAK ASLPKEGWEG SSLRQRFVHA GWRAPEAIAV YFGIKTILTF GLPLLLWAGL
VGRFNADQQS QFMSLLFGAA VVGFYLPNVL LSLKIKYRQR EIFESFPDSL DLIMVCVEAG
LSLDAAILRV VDDMRTARPV MAEEYELLTL ELRAGLSREK ALRNLAARTG VDDVSMLVAM
LIQADRFGTS VADSLRVHSD MLRTKRHMLA EERAAKIGTK VLFPLIFCIF PSLYVVLLGP
AALQMIAALG APGGN
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