Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0638 |
Symbol | |
ID | 1219443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 684598 |
End bp | 685122 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637236997 |
Product | hypothetical protein |
Protein accession | NP_518759 |
Protein GI | 17545357 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.550693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGCTCA AGGGGCAGGT GTCTAGCCGC AAGCGTGTGT TGATCAATGG ATGTACTGGC GCGGTTGGCG CAATGGCGGC ACAGCTTGCT ATGGCGAACG GCGCGCAGGT AGCGGGCACG TGTAGCCGCA CGTCGATGGA GCGCGCAAGA AAGGCCGGTT TGGATCGCAT TTTTGATTAT GCCGATCCAG ATTCCTGGTC CGCGGAGGGA CCATTTGATG TGATCTTCGA CACCGCTGGC ACGCTACCAG TCGGCCACGG GCTATCGATG CTCAAGCCGA GGGGCGTCTT CGTCGACATC AATCCGACAC CGCGCCGCCT GCTGCGAGGC ATGTTGACTC GTCGCTACAA ACTCGTGTTT GCCACGATGG CTTTGCGGCA TCTCGCCGAG ATCGCGCAAC TGGCGGCGCA AGGCACCCTG AAGCCGACTA TCGGCCTGGA AAAGCCATTC TCCGACGCCG TGGAAACAAT CACGGCGGTC GAGCATGGTT TGCGTACTCC GGGCCGGGTG GTCCTTACTT TCTAA
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Protein sequence | MLLKGQVSSR KRVLINGCTG AVGAMAAQLA MANGAQVAGT CSRTSMERAR KAGLDRIFDY ADPDSWSAEG PFDVIFDTAG TLPVGHGLSM LKPRGVFVDI NPTPRRLLRG MLTRRYKLVF ATMALRHLAE IAQLAAQGTL KPTIGLEKPF SDAVETITAV EHGLRTPGRV VLTF
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