Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0628 |
Symbol | |
ID | 1219433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 676315 |
End bp | 677253 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637236987 |
Product | hypothetical protein |
Protein accession | NP_518749 |
Protein GI | 17545347 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGGTGG CACGGACCTG GGGGTCGGCG CCGCGCCCGC CCGGCTCATG GCTAGCCCTG CGCGAAGACG GCTTAGTGCA AGGCTCGGTG TCCGGCGGCT GCGTTGAAGA CGATCTGATC GCCCGCATGC GGGACGGGTG TCTCTGCGGC AGCCTGCCGT TTGTCTGCAG GTATGGCGTG ACCAAGGACG AAGCAACGCG CTTCGGCCTG CCCTGTGGCG GCACGCTGGA ACTCGTGGTG GAGCCCGCGC CGGATGTGGC ATTGCTGAAA GCGCTGGCAG AGCGATTGGC CAGGCGAGAG CTGGTTCTGC GTCACGTGGA TGTGGCTCGC GGAACCACCT CCATCACAAG CGCGCAGCGC GACAGTGCGC TGACCTGGGA CGGTACGCGC CTGACCATGG TGTACGGCCC GCAATGGCGT CTGCTCATCG TCGGTGCTGG GCAGGTGTCG CGCTATCTCG CGCAAATGGC GCAAGCACTG GACTACGACG TTACCGTCTG CGATCCGCGT GAGGAATATG GGCCAACGTG GGATGTGCCT GGCGCGCGTC TGGCGACCAC CATGCCGGAC GACACGCTGC TCGCCATGGC GCCGGACGCC CGCTGCGCGG TGGTGGCGCT CACGCACGAT CCGAAGCTCG ATGACATGGT GCTGCTGGAA GCGCTCAGGT CCCCGGCGTT CTACGTGGGT GCCCTGGGTT CCCATTTGAA CAGCATGCGC CGACGAGAAC GACTTGCGCA GTACTTCGAC TTCACGGAAG AGGCGTTGGC GCGCCTGCAC GGCCCGGTCG GTTTGCCCAT CGGCAGCCAC ACACCGCCCG AGATTGCCGT TGCCATTCTC GCCGAGATGA CGGCCGTGAA AAACGGCGCG GCGTTGCCGG TGACACGAAC GACAGCAGCG ACACAGACAG ATCACGCCTC TGCATGTGAA GTGCCTTGA
|
Protein sequence | MTVARTWGSA PRPPGSWLAL REDGLVQGSV SGGCVEDDLI ARMRDGCLCG SLPFVCRYGV TKDEATRFGL PCGGTLELVV EPAPDVALLK ALAERLARRE LVLRHVDVAR GTTSITSAQR DSALTWDGTR LTMVYGPQWR LLIVGAGQVS RYLAQMAQAL DYDVTVCDPR EEYGPTWDVP GARLATTMPD DTLLAMAPDA RCAVVALTHD PKLDDMVLLE ALRSPAFYVG ALGSHLNSMR RRERLAQYFD FTEEALARLH GPVGLPIGSH TPPEIAVAIL AEMTAVKNGA ALPVTRTTAA TQTDHASACE VP
|
| |