| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0622 |
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| Symbol | dbpA |
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| ID | 1219427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 668879 |
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| End bp | 670276 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637236981 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | NP_518743 |
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| Protein GI | 17545341 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG AACCGACTGC CCCACCCTTC AGTACCCTTG CGCTCGCCCC CGCCGTACTC
GCGAATCTCG CGCAGCTTGG TTACACCGAC ATGACGCCGA TCCAAGCCGC GAGCCTGCCG
ATCGCGCTCG CGGGTCACGA CCTGATCGCG CAGGCGAAGA CCGGCAGCGG CAAAACCGCA
GCGTTCTCGC TCGCGCTGCT CGCGCGGCTC GACACGCGCC GCTTCGACGT GCAGGCGATG
GTGCTCTGCC CGACGCGCGA GCTTGCCGAT CAGGTCGCGC AGGAAATCCG CCGCCTCGCG
CGCGCCGAGG AAAACGTGAA AGTGCTGACG CTCTGCGGCG GCACGCCAAT GCGTCCGCAG
GCGGCAAGCC TCGAGCACGG CGCGCATGTC GTCGTCGGTA CGCCGGGGCG CATCATGGAC
CATCTCGAAC GCGGCAATCT CGCGCTCGGC GCGCTGAAGA CGCTCGTGCT CGACGAAGCG
GACCGGATGC TCGACATGGG GTTCTTCGAC GACATCGCGA CGGTCGTGCG CCAGTGTCCG
CCTGAACGGC AGACGCTGCT GTTCTCGGCG ACCTACCCAG ACGGGATCGC AAAGCTGAGC
CGGCAGATCC TGCGGAATCC GAAGGAGGTG AAACTCGAAG AGCGCCACGA CGACAGCAAG
ATTCGCCAGC GCTTCTACGA GGTGACCGAT GACGAGCGAC TGCATGCGGT CGGGCTGCTG
CTGAAGCACT ATCGGCCGGT CAGCACACTC GCGTTCTGCA ACACGAAGCA GCAATGCCGC
AACCTGCTCG ACGTGCTGCG TGCGCAAGGC TTCCATGCGC TCGCGCTGCA TGGCGAGCTC
GAGCAGCGCG AGCGCGATCA GGTATTGATC CAGTTTGCGA ACCGGAGCTG CTCGGTGCTC
GTCGCAACCG ACGTTGCCGC ACGCGGGCTC GACATCGCGC AGCTCGAAGC AGTGATCAAC
GTTGATGTGA CGCCCGATCC CGAAGTGCAC GTGCATCGGA TCGGCCGCAC GGGCCGTGCC
GATCAGGACG GTTGGGCGCT GAGCCTCGCG AGCATGGACG AGATGGGGCG TGTCGGCGGC
ATCGAGCAGG CGCTCGGGCG CGAGGTCGAA TGGCATCGGC TCGCCGAACT CGACGCCAGC
AGCGACGCAC CGCTGCTACC GCCGATGGAG ACGCTACAGA TTCTCGGCGG ACGCAAGGAC
AAGATCCGCC CCGGCGATGT GCTCGGCGCG CTGACCGGCG ACGCGGGCTT TCGCGGCGAC
CAGATCGGCA AGATCAACGC GACCGAATTC TCGACCTACG TCGCGGTCGA GCGCGGCATC
GCGCGCGACG CGCTGCGCAA GCTCAACGCA GGCAAGGTGA AGGGCAAGAA GGTCAGGGTT
CGGTTGATGG ACGAATGA
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| Protein sequence | MTIEPTAPPF STLALAPAVL ANLAQLGYTD MTPIQAASLP IALAGHDLIA QAKTGSGKTA
AFSLALLARL DTRRFDVQAM VLCPTRELAD QVAQEIRRLA RAEENVKVLT LCGGTPMRPQ
AASLEHGAHV VVGTPGRIMD HLERGNLALG ALKTLVLDEA DRMLDMGFFD DIATVVRQCP
PERQTLLFSA TYPDGIAKLS RQILRNPKEV KLEERHDDSK IRQRFYEVTD DERLHAVGLL
LKHYRPVSTL AFCNTKQQCR NLLDVLRAQG FHALALHGEL EQRERDQVLI QFANRSCSVL
VATDVAARGL DIAQLEAVIN VDVTPDPEVH VHRIGRTGRA DQDGWALSLA SMDEMGRVGG
IEQALGREVE WHRLAELDAS SDAPLLPPME TLQILGGRKD KIRPGDVLGA LTGDAGFRGD
QIGKINATEF STYVAVERGI ARDALRKLNA GKVKGKKVRV RLMDE
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