Gene RSc0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0619 
Symbol 
ID1219424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp666136 
End bp666774 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content60% 
IMG OID637236978 
Productputative transmembrane hydrogenase cytochrome B- type subunit 
Protein accessionNP_518740 
Protein GI17545338 
COG category[C] Energy production and conversion 
COG ID[COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACTG CACGGCAATC GGCGGCGATC AGACCAAAGC CTCGCACAAG CCCGTCCGCC 
ACGCTTCAGC CAGCCTGGCT GCGCATCACG CACTGGCTCA ATGCGATCGC GGTCATCATC
ATGATGCTCA GCGGCTGGCG TATCTACAAC TCTTCACCGC TGTTCGCCTT CCGTTTTCCC
AACGAAATCA CGCTCGGCGG CTGGCTTGCC GGCGCACTGC AATGGCACTT TGCCGCCATG
TGGCTGCTGG TGGCTAACGG TCTGGTTTAC CTGGCACTGA ATGTTGTTAC CGGCCGATTC
TGGAGGCGCT TCATACCGGT CTCCATTCCT TCCGCTCTGC ACGACATGGT TGCGGCCCTG
CGAGGAAGGC TCTCGCACGC CAATCTGGCC GAATACAACG CTGCGCAGAA GCTGCTCTAT
CTCGGGGTGG TCGCCGTGAT CGTGATCACG GTCCTGTCTG GCCTCGCCAT CTGGAAGTCA
GTGCAGTTTC CGCTGCTTCG AATGCTGATG GGAGGGTATG ACGCGGCGCG ATGGGTGCAT
TTCATTGGCA TGAGCGCGAT CGCCCTCTTC ATTGTCGTCC ATGTGGTGAT GACTGTACTG
GTACCACGCA CACTCATCAT CATGCTGCGC GGCCGCTAG
 
Protein sequence
MKTARQSAAI RPKPRTSPSA TLQPAWLRIT HWLNAIAVII MMLSGWRIYN SSPLFAFRFP 
NEITLGGWLA GALQWHFAAM WLLVANGLVY LALNVVTGRF WRRFIPVSIP SALHDMVAAL
RGRLSHANLA EYNAAQKLLY LGVVAVIVIT VLSGLAIWKS VQFPLLRMLM GGYDAARWVH
FIGMSAIALF IVVHVVMTVL VPRTLIIMLR GR