Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0619 |
Symbol | |
ID | 1219424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 666136 |
End bp | 666774 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637236978 |
Product | putative transmembrane hydrogenase cytochrome B- type subunit |
Protein accession | NP_518740 |
Protein GI | 17545338 |
COG category | [C] Energy production and conversion |
COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGACTG CACGGCAATC GGCGGCGATC AGACCAAAGC CTCGCACAAG CCCGTCCGCC ACGCTTCAGC CAGCCTGGCT GCGCATCACG CACTGGCTCA ATGCGATCGC GGTCATCATC ATGATGCTCA GCGGCTGGCG TATCTACAAC TCTTCACCGC TGTTCGCCTT CCGTTTTCCC AACGAAATCA CGCTCGGCGG CTGGCTTGCC GGCGCACTGC AATGGCACTT TGCCGCCATG TGGCTGCTGG TGGCTAACGG TCTGGTTTAC CTGGCACTGA ATGTTGTTAC CGGCCGATTC TGGAGGCGCT TCATACCGGT CTCCATTCCT TCCGCTCTGC ACGACATGGT TGCGGCCCTG CGAGGAAGGC TCTCGCACGC CAATCTGGCC GAATACAACG CTGCGCAGAA GCTGCTCTAT CTCGGGGTGG TCGCCGTGAT CGTGATCACG GTCCTGTCTG GCCTCGCCAT CTGGAAGTCA GTGCAGTTTC CGCTGCTTCG AATGCTGATG GGAGGGTATG ACGCGGCGCG ATGGGTGCAT TTCATTGGCA TGAGCGCGAT CGCCCTCTTC ATTGTCGTCC ATGTGGTGAT GACTGTACTG GTACCACGCA CACTCATCAT CATGCTGCGC GGCCGCTAG
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Protein sequence | MKTARQSAAI RPKPRTSPSA TLQPAWLRIT HWLNAIAVII MMLSGWRIYN SSPLFAFRFP NEITLGGWLA GALQWHFAAM WLLVANGLVY LALNVVTGRF WRRFIPVSIP SALHDMVAAL RGRLSHANLA EYNAAQKLLY LGVVAVIVIT VLSGLAIWKS VQFPLLRMLM GGYDAARWVH FIGMSAIALF IVVHVVMTVL VPRTLIIMLR GR
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