| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0611 |
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| Symbol | apbE |
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| ID | 1219416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 658277 |
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| End bp | 659173 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637236970 |
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| Product | thiamine biosynthesis lipoprotein apbE precursor transmembrane |
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| Protein accession | NP_518732 |
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| Protein GI | 17545330 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.54431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCGC CCTCAAGTAA GCTGCGCCGC GCCCGGCCGC TGCTCGGGAC CCTGGTCGAC
ATCACGGTCA GGGGCCCGGA CGCGACCTTG CAGGCCGCGC TCGACGCGGC GTTCGCGGCC
GTCGAGCGCG TGCAGCGCCT GATGAGCTTT CACGCGGAAG ACAGCGATGT CTCCCGCATC
AACGCCGCCG AGGCGGGCAG CGCGGTCTGC GTCGATGCGC AGACGTACTG CGTGCTGGAG
CGCGCTGTGG CGCTGGGCGA GCTGTCCGAC GGCGTGTTCG ACATCGCCAC GGCGGGCGTG
CTGGTGGAGC AGGGCTTTCT GCCGCGGCAC GCCGGCGCGC AGCCTCCCGC TCCGGGGGCG
ACCTTCCGGG ATCTCATCTT GCAGGCGGAC CACCGGGTGC AATGGCGCCG CAAGGGCTGG
ATCGACCTGG GCGGCATCGC CAAGGGGTAC GCCGTCGATT GCGCGATCGC GGCGCTGCGG
GCCCATCGCG TGGACAGCGG CATCGTCAAT GCCGGCGGCG ACCTGCGCTG CTTCGGCCGG
GCGGAACCGA TCCATGTGCG CCGGCCGGAT GCGCCGGCCA CGCTGGTGCC GCTGGGGTGG
CTGCACGATC TGGCCATTGC GACCTCCGGC GGCTATTTCG CCGGCATCGA GCGCGACGGC
CGGCAGATCG ATCCGCTGGT CGACCCCGGC CGGCGGGCCT GCGCCGTCTG GGAGGACAGC
ATCAGCGTGG TGGCCGCCGA CTGCATGACG GCGGATGCGC TGACCAAGGT GGTGCGCCTC
GCGCGTCAGC GCGCGCCCGA GATCCTCGAT CGCTGCCACG CGCAGGCCGT GGTGGTCGGC
GCGCAGGCCA TCGGCATGTG CGGCGCGCCG CTGCTGCGCA GGGCCGACGC GCCATGA
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| Protein sequence | MPSPSSKLRR ARPLLGTLVD ITVRGPDATL QAALDAAFAA VERVQRLMSF HAEDSDVSRI
NAAEAGSAVC VDAQTYCVLE RAVALGELSD GVFDIATAGV LVEQGFLPRH AGAQPPAPGA
TFRDLILQAD HRVQWRRKGW IDLGGIAKGY AVDCAIAALR AHRVDSGIVN AGGDLRCFGR
AEPIHVRRPD APATLVPLGW LHDLAIATSG GYFAGIERDG RQIDPLVDPG RRACAVWEDS
ISVVAADCMT ADALTKVVRL ARQRAPEILD RCHAQAVVVG AQAIGMCGAP LLRRADAP
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