Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0610 |
Symbol | |
ID | 1219415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 657781 |
End bp | 658296 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637236969 |
Product | putative signal peptide protein |
Protein accession | NP_518731 |
Protein GI | 17545329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.739239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCACG GACAATGGCT ATGGGTGCCC CTGGCGGCGA TCTCCACCTC GGTCTATGCG ACCACTTATT TCACGACCGA GCAGGCGCAG CAGGCGCTTT TTCCCGGCGA GAAGCTGACG CCCGCGTTCG TCACGCTCAC CGCTGACCAG GCGCGCCAGA TCGAAAAGGC CGCCGACGTC AACGTCCGCC ACAAGGACAT CCAGGCATGG AAGGCCGAGC ACGGCGGCTG GTTCATCCTC GACGAGGTGG TCGGCAAGCA CGAGTTCATC ACTTACGCCG TCGCCCTGAA CGCCAACGGC AGCGTGCGCC AGATCGAGAT CATGGATTAC CGCGAATCGT ACGGCTACGA GGTGCGCAAT CCGGAGTGGC GCAAGCAGTT CGTCGGCAAG ACGGCGGCAG ATCCGCTGCG CCTGAACGAA GACATCCGCA ACATCAGCGG CGCGACGCTG TCGTCGAGGC ATATCACCGA TGGCGTGAAG CGGGTGCTGG CCACCTATGC CGTCGCCCTC AAGTAA
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Protein sequence | MQHGQWLWVP LAAISTSVYA TTYFTTEQAQ QALFPGEKLT PAFVTLTADQ ARQIEKAADV NVRHKDIQAW KAEHGGWFIL DEVVGKHEFI TYAVALNANG SVRQIEIMDY RESYGYEVRN PEWRKQFVGK TAADPLRLNE DIRNISGATL SSRHITDGVK RVLATYAVAL K
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