Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0604 |
Symbol | |
ID | 1219409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 650519 |
End bp | 651388 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236963 |
Product | hydrolase oxidoreductase protein |
Protein accession | NP_518725 |
Protein GI | 17545323 |
COG category | [R] General function prediction only |
COG ID | [COG0627] Predicted esterase |
TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.197759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.276629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAT CACCGACACT CGAACTGCTC TCGGAGCACG CCTGCTTCGG CGGCGTGCAG CGCTTTTACC GGCACGCCTC GGCGGCGATC GGGCTGCCGA TGCGCTTCTC GGTCTACCTG CCGCCGCAGG CCCTGGCCGG CGAGCGCTGC CCGGCGCTGG TCTACCTCGC CGGGCTGACC TGCACCGAAG AGACCTTCCC GATCAAGGCC GGCGCCCAGC GCATCGCCGC GCGCGAGGGG CTGATCCTGA TCGCGCCCGA TACCAGTCCG CGCGACGCCA ACGTGCCAGG CGAGGCGGAC AGCTGGGATT TCGGCGTCGG CGCCGGCTTC TACCTGGATG CGACGCAGGC GCCGTGGCGC GAGCGCTACC GGATGGAGAC CTACATCGTC GAGGAGCTGT ACCACATTGC GCGGGTCGCC TTCCCGGTGG CGGCGGGGCG CGTCGGCATC TTCGGGCATT CGATGGGCGG GCACGGTGCG TTGACGCTGG CGCTGCGTCA CCGGGAGCGC TTCGCCTCGG TCTCGGCGTT TGCGCCCATT GCGCATCCGT CGGCCTGCCC CTGGGGCGTG AAAGCGTTCA CCGGCTACCT CGGCGAGGAC CGCACCGCCT GGGCCGCGCA CGACGCCACG CGGCTGATGC AACTGGCGAA CAACCCGTTT CCTGGCGGCA TCCTGATCGA TCAAGGCGAG GCGGACACCT TCCTCGCCGA GCAGCTGTAC CCCGATGACT TCGCCGCCGC GTGCGAGGCG GCCGGGCAGC CACTGCAACT GCGCCGCCAT CCCGGCTACG ACCACGGCTA TTACTTCATC CAGACCTTCA TCGAAGACCA CCTGCGGCAC CACGCGGCAC AACTGCGCGG CGTCGGCTAG
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Protein sequence | MSQSPTLELL SEHACFGGVQ RFYRHASAAI GLPMRFSVYL PPQALAGERC PALVYLAGLT CTEETFPIKA GAQRIAAREG LILIAPDTSP RDANVPGEAD SWDFGVGAGF YLDATQAPWR ERYRMETYIV EELYHIARVA FPVAAGRVGI FGHSMGGHGA LTLALRHRER FASVSAFAPI AHPSACPWGV KAFTGYLGED RTAWAAHDAT RLMQLANNPF PGGILIDQGE ADTFLAEQLY PDDFAAACEA AGQPLQLRRH PGYDHGYYFI QTFIEDHLRH HAAQLRGVG
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