Gene RSc0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0602 
Symbol 
ID1219407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp648262 
End bp649005 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content73% 
IMG OID637236961 
Producthypothetical protein 
Protein accessionNP_518723 
Protein GI17545321 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0796336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.593328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CCGACGCCAC GCCCGCCCCG CCGCCGCAAC CGCAGCAGCC GGCCCGCCCG 
CTGCGCGCCG CCGCGCATGG GCTGGCGACC TGCGAACGCT GCGGCCTGCT GGCCCGCCTG
CCCGGCGCGC GCGAGGGTGC CCGCGCCGCC CTGGCGCAGG AGGAGGCCCC CGACCACGCC
GCCGCCGCAC CGGTCTGCCC GCGCTGCCTG TCGCCGATCC ACGTGCGCAA GCCCGACAGC
CTCAGGCGCT GCTGGGCGCT GCTGCTGGCC GCCGCCGCCA TGTACCTGCC CGCCAACATG
CTGCCGGTGA TGATCACGGA AACGCTGCTT GGCACCCAGC AGGACACCAT CCTGAGCGGC
ATCGTCTACC TGTGGACATC GGGCTCGTGG CACCTGGCCA TCATCGTGTT CATCGCCAGC
TTCTTCGTGC CGCTGGCCAA GCTGGGCATC CTGGCGGTGC TGTGCCTGTC GGTGCGGCAG
CGCTGGCGCT GGAAGCCGCG CACGCGCACG CGCCTGTATG TGATCGTCGA GGCGGTCGGC
CGCTGGTCGA TGCTCGACGT GTTCGTGATC GCGCTGCTGG CGGGGCTGGT GCACCTGTCC
ACGCTGGCGG TCATCAAGCC CGGCCCGGGC GTCGCCCCCT TTGCCGGCGT GGTCGTGCTG
ACCATGTTCG CCGCCCGCTG TTTCGACCCC CGCCTGATCT GGGACGCCAT CGACGAGCCC
GACCCCGAAG AGACCACCGC ATGA
 
Protein sequence
MTTADATPAP PPQPQQPARP LRAAAHGLAT CERCGLLARL PGAREGARAA LAQEEAPDHA 
AAAPVCPRCL SPIHVRKPDS LRRCWALLLA AAAMYLPANM LPVMITETLL GTQQDTILSG
IVYLWTSGSW HLAIIVFIAS FFVPLAKLGI LAVLCLSVRQ RWRWKPRTRT RLYVIVEAVG
RWSMLDVFVI ALLAGLVHLS TLAVIKPGPG VAPFAGVVVL TMFAARCFDP RLIWDAIDEP
DPEETTA