Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0602 |
Symbol | |
ID | 1219407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 648262 |
End bp | 649005 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637236961 |
Product | hypothetical protein |
Protein accession | NP_518723 |
Protein GI | 17545321 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0796336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.593328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG CCGACGCCAC GCCCGCCCCG CCGCCGCAAC CGCAGCAGCC GGCCCGCCCG CTGCGCGCCG CCGCGCATGG GCTGGCGACC TGCGAACGCT GCGGCCTGCT GGCCCGCCTG CCCGGCGCGC GCGAGGGTGC CCGCGCCGCC CTGGCGCAGG AGGAGGCCCC CGACCACGCC GCCGCCGCAC CGGTCTGCCC GCGCTGCCTG TCGCCGATCC ACGTGCGCAA GCCCGACAGC CTCAGGCGCT GCTGGGCGCT GCTGCTGGCC GCCGCCGCCA TGTACCTGCC CGCCAACATG CTGCCGGTGA TGATCACGGA AACGCTGCTT GGCACCCAGC AGGACACCAT CCTGAGCGGC ATCGTCTACC TGTGGACATC GGGCTCGTGG CACCTGGCCA TCATCGTGTT CATCGCCAGC TTCTTCGTGC CGCTGGCCAA GCTGGGCATC CTGGCGGTGC TGTGCCTGTC GGTGCGGCAG CGCTGGCGCT GGAAGCCGCG CACGCGCACG CGCCTGTATG TGATCGTCGA GGCGGTCGGC CGCTGGTCGA TGCTCGACGT GTTCGTGATC GCGCTGCTGG CGGGGCTGGT GCACCTGTCC ACGCTGGCGG TCATCAAGCC CGGCCCGGGC GTCGCCCCCT TTGCCGGCGT GGTCGTGCTG ACCATGTTCG CCGCCCGCTG TTTCGACCCC CGCCTGATCT GGGACGCCAT CGACGAGCCC GACCCCGAAG AGACCACCGC ATGA
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Protein sequence | MTTADATPAP PPQPQQPARP LRAAAHGLAT CERCGLLARL PGAREGARAA LAQEEAPDHA AAAPVCPRCL SPIHVRKPDS LRRCWALLLA AAAMYLPANM LPVMITETLL GTQQDTILSG IVYLWTSGSW HLAIIVFIAS FFVPLAKLGI LAVLCLSVRQ RWRWKPRTRT RLYVIVEAVG RWSMLDVFVI ALLAGLVHLS TLAVIKPGPG VAPFAGVVVL TMFAARCFDP RLIWDAIDEP DPEETTA
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