Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0600 |
Symbol | |
ID | 1219405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 645990 |
End bp | 646625 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637236959 |
Product | hypothetical protein |
Protein accession | NP_518721 |
Protein GI | 17545319 |
COG category | [S] Function unknown |
COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0442544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.826922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATGC GAGCAAACCG TTCTTCCTTC CTGCGGCTGG CGGGCATGGC CGGTGCCGCC GCCCTGATGG GCGCGTGCGC CTCGCCGGAG CCGACGCTGC ATACGCTGTC GCTGCGGGCG GCGGCGCCCG CGCCCGAGGC GGCGCGCATC CAGCGCGCCT TCCGGCTGTC CGGCGTGCGC GTGCCCGAGC GGCTCGACAA GCCGCAGATC GTGCTGCGCA CCTCCGACAG CCAGGTACAG GAACTGGAGC AGCAGCGCTG GGCGGCGCCG TTCGGCTCGG AGCTGCGCGA CGCGCTGTCG GCCGGGCTGG CCGATGCGCT GGCCGCGGTG GACGTGGGTG GCGCGACCGC GCCCGCCGGC GTGCCGCTCT ATCGCATCAG CACGGACGTG CAGCGCTTCG ACGCGCGGCC GGCCCAGGAC GTATCGGCGC TGGTGACTTG GCGCGTGTCG CGCGACGCGG CCGCGCCGGA CAGCGCATTG ACCTGCCAGG CCACACTGAC CGAACCGGCC GGCCGCGAGG TCGACGCGGT GGTGACGGCG ACGCAGGGCG TGGTCCGGCA GTGGTCGCAG CGCATCGCGG AGAGCGTGCG CAGCCTCGAA GCGCCGGGCA AGGGCCTGCC CGCCTGGTGC CGCTAG
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Protein sequence | MMMRANRSSF LRLAGMAGAA ALMGACASPE PTLHTLSLRA AAPAPEAARI QRAFRLSGVR VPERLDKPQI VLRTSDSQVQ ELEQQRWAAP FGSELRDALS AGLADALAAV DVGGATAPAG VPLYRISTDV QRFDARPAQD VSALVTWRVS RDAAAPDSAL TCQATLTEPA GREVDAVVTA TQGVVRQWSQ RIAESVRSLE APGKGLPAWC R
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