Gene RSc0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0600 
Symbol 
ID1219405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp645990 
End bp646625 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content75% 
IMG OID637236959 
Producthypothetical protein 
Protein accessionNP_518721 
Protein GI17545319 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0442544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.826922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGC GAGCAAACCG TTCTTCCTTC CTGCGGCTGG CGGGCATGGC CGGTGCCGCC 
GCCCTGATGG GCGCGTGCGC CTCGCCGGAG CCGACGCTGC ATACGCTGTC GCTGCGGGCG
GCGGCGCCCG CGCCCGAGGC GGCGCGCATC CAGCGCGCCT TCCGGCTGTC CGGCGTGCGC
GTGCCCGAGC GGCTCGACAA GCCGCAGATC GTGCTGCGCA CCTCCGACAG CCAGGTACAG
GAACTGGAGC AGCAGCGCTG GGCGGCGCCG TTCGGCTCGG AGCTGCGCGA CGCGCTGTCG
GCCGGGCTGG CCGATGCGCT GGCCGCGGTG GACGTGGGTG GCGCGACCGC GCCCGCCGGC
GTGCCGCTCT ATCGCATCAG CACGGACGTG CAGCGCTTCG ACGCGCGGCC GGCCCAGGAC
GTATCGGCGC TGGTGACTTG GCGCGTGTCG CGCGACGCGG CCGCGCCGGA CAGCGCATTG
ACCTGCCAGG CCACACTGAC CGAACCGGCC GGCCGCGAGG TCGACGCGGT GGTGACGGCG
ACGCAGGGCG TGGTCCGGCA GTGGTCGCAG CGCATCGCGG AGAGCGTGCG CAGCCTCGAA
GCGCCGGGCA AGGGCCTGCC CGCCTGGTGC CGCTAG
 
Protein sequence
MMMRANRSSF LRLAGMAGAA ALMGACASPE PTLHTLSLRA AAPAPEAARI QRAFRLSGVR 
VPERLDKPQI VLRTSDSQVQ ELEQQRWAAP FGSELRDALS AGLADALAAV DVGGATAPAG
VPLYRISTDV QRFDARPAQD VSALVTWRVS RDAAAPDSAL TCQATLTEPA GREVDAVVTA
TQGVVRQWSQ RIAESVRSLE APGKGLPAWC R