| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0599 |
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| Symbol | |
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| ID | 1219404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 644479 |
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| End bp | 645993 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637236958 |
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| Product | putative transcription regulator protein |
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| Protein accession | NP_518720 |
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| Protein GI | 17545318 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0558391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACA GCGCCCATTC CGCTCCTGCC GCCATGTCCG TGATCGAGCT GACTCCCGCC
CCTGCCGTGC GCCCGCCTGG CGCGCAGCCG CTGTATCGCA TGCTGGCCGA CCACTACCTC
GGCGCCATGC GCAGCGGCGT GCTCACGCCC GGCCAGCGCA TGCCGTCCGT CCGCACGCTG
ATGCGCACGC ACAGCGTCAG CCTGTCGACC GCGCTGCAGG TCTGCCGCCA TCTGGAGGCC
GAAGGGTGGC TGGAGGCGCG CGAGCGCTCG GGCTATTTCG TGCGCCAGCC GCGGCGCGCG
CTGCTGGCGC CGGCCAAGGA GCCGGAAGTG GCCACGCCCG ACCCGGCCGC CTACGTGGGC
GTGCATGCGC GGGTGTCGGC CATCATCGCG CGCGGGCTGC AGGCCCGGGC CCGGGTCGAC
CTGTCGGGCG CCAGCGGCGC GGCCACGCTG TATCCGTCCG CTGTGCTCAA CCGCATCGCC
ACGCAGATGC TGCGCGCGCG TCCGCTGCTG CTGACGCAGG CCGTCACGCC CAACGGGCAT
CCGGATTTGC AGAGCGCCGT GGCGCGCCGC GCGCTCGAAA TGGGCGTGCA GGTGGCGCCG
GACGACGTGG TGGTCACGCA CGGCTGCATC GAGGCGGTGA ACCTGGCGCT GCGCGCGGTG
GCGCAGCCGG GCGATACGGT GGCGGTGGAG TCGCCCACCT ACTACGGCCT GCTGCAGGTG
CTCGAATGCC TGGGCATGCG CGCGGTGGAG ATCCCCACCA GCCCGCGCAC CGGCATCTCG
CTGGAAGCGC TGGAGATGGC GGTGCAGGCC TATGGCAACA TCCGCGCGGT GGTGGTGGTG
CCCAATCTGC AGAACCCGCT CGGCAGCATC ATGCCGGACG CGGCCAAGCG GCGGCTGGCG
GCCTTCTGCG AAGCGCACGC CATCCCGCTG ATCGAAGACG ATACCTACAG CGCCCTGGGC
GACGGCCCCG CGCCGCTCAA GGCCATCAAG GCCTGGGACC GCACCGGCAA CGTGATCTAC
TGCGCCTCGC TCAACAAGAC GATCGCGCCG GGCCTGCGGC TCGGATGGAT GACGGGCGGC
CGCTGGCAAG AGCGCGTGGA GATGCTGAAG TTCGCGCAGT CGCGCCCGAA CGATTCATGG
TCGCAGGTGA CGGCCGCGCG CCTGCTGGCA TCCGGCGCGT ACGACCGCCA TATCCGCACC
TTGCGCCAGA CGCTGCGCGA GCAGCGCGAG CGCATGGCCG AGGCGATCGC CGGCTGCTTC
CCGGCCGGCA CGCGGCTGTC GGTGCCGGCC GGCGGCGTGG CGATGTGGGT GGAGCTGCCG
GCCAGCGTGT CGTCGATGGC GCTGTTCGAG ATGGCGCTGG CGCATGGCAT CCGCATTGCG
CCGGGGACGA TGTTCTCCAA CCTGAACCGC TTCGACCACT ACTTCCGCAT CTGCTTCGGC
CTGCCGTACA CGGCCGAGGT GGAGACGGCG CTGGCGCAGC TCGGCCGGCT CGCGCACCAG
CTGGCCGAAG CCTAG
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| Protein sequence | MGDSAHSAPA AMSVIELTPA PAVRPPGAQP LYRMLADHYL GAMRSGVLTP GQRMPSVRTL
MRTHSVSLST ALQVCRHLEA EGWLEARERS GYFVRQPRRA LLAPAKEPEV ATPDPAAYVG
VHARVSAIIA RGLQARARVD LSGASGAATL YPSAVLNRIA TQMLRARPLL LTQAVTPNGH
PDLQSAVARR ALEMGVQVAP DDVVVTHGCI EAVNLALRAV AQPGDTVAVE SPTYYGLLQV
LECLGMRAVE IPTSPRTGIS LEALEMAVQA YGNIRAVVVV PNLQNPLGSI MPDAAKRRLA
AFCEAHAIPL IEDDTYSALG DGPAPLKAIK AWDRTGNVIY CASLNKTIAP GLRLGWMTGG
RWQERVEMLK FAQSRPNDSW SQVTAARLLA SGAYDRHIRT LRQTLREQRE RMAEAIAGCF
PAGTRLSVPA GGVAMWVELP ASVSSMALFE MALAHGIRIA PGTMFSNLNR FDHYFRICFG
LPYTAEVETA LAQLGRLAHQ LAEA
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