Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0590 |
Symbol | |
ID | 1219395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 636508 |
End bp | 637044 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236949 |
Product | putative transcription regulator protein |
Protein accession | NP_518711 |
Protein GI | 17545309 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGGAT TGCCCACGAT CGATGCCGCC ATGCCGAGCC TGACCCACAT CGAAGACGCC TATCCCGCCG TGGCCGAGTC CGGCCACTTC AATCCGCGCA TGGAGGACGT GGAGTATGGC GCGCTGGATG GGCTGCTCGG CTACGCGGTG CGGCGCGCCC AGCTGCGTGT CTACGAAGAC TTCGTGCGCT CGCTGCAGGC GTGGAACATC ACGCCGCCGC GCTTCTCGGC CATGACCGTG ATCGCGCACA ACCCCGACCT GAAGCTGACC GAGCTGGCCG GCATCCTGGG CGTGGCCCGC TCGGGGGCGG TGCTGCTGGT CGATACGCTC GAAGCGATGG GCATGGTCGA GCGGCTCCCG TCGCCGGTGG ACCGGCGCGC CTTCCGGCTG GCGCTGACCG ACAAGGGAGC GGCCACGCTG CGGGACATCA CCGAGGTCGT GGTCGCCCAC GATGCGCGGG TCACGGCCCA TCTGTCGGCC GACGAGCGGC GCACGCTGCT GGAACTGCTC AACAAGCTGG CGGCCGGCCC GGCCTGA
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Protein sequence | MVGLPTIDAA MPSLTHIEDA YPAVAESGHF NPRMEDVEYG ALDGLLGYAV RRAQLRVYED FVRSLQAWNI TPPRFSAMTV IAHNPDLKLT ELAGILGVAR SGAVLLVDTL EAMGMVERLP SPVDRRAFRL ALTDKGAATL RDITEVVVAH DARVTAHLSA DERRTLLELL NKLAAGPA
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