| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0584 |
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| Symbol | |
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| ID | 1219389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 627215 |
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| End bp | 628759 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637236943 |
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| Product | D-alanyl-D-alanine carboxypeptidase |
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| Protein accession | NP_518705 |
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| Protein GI | 17545303 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAA TCATCCGCCT GACCCGTTTG CTCCGCCTGT CGCGCTGTGC CGTTGCCTGC
GCGGCCCTCC TCGCCTTCAC CGCCGCACCG CTGGCGCAGG CCAGAAAACC CGCCCGCGCC
CATGCCGCTC CCGCCGCCAC CGTCGCCCAG AAGCGGCAGG CCGCGCACAA TCCGGCCGGG
CTGCCCGCCA ATGTGGCGCT GGCGTTCGCG CGGGCGCATA TCCCGCTCGA TGCGGTCAGC
GTGTTCGTCA TCCGCACCGG CACCGCCACG CCCATCCTGC AATGGAACGC CGACGCCGGC
ATGAATCCGG CCTCGACCAT GAAGCTGCTG ACCACCTTCG CCGGCCTCGA CCTGCTGGGC
CCCGATTTCC GCTGGAAGAC CTCCGCCTAC GCCGACAGGC CTCCGGCGGG CGGCGTGCTC
AGCGGCAACC TCTACCTGCG CGGCCAGGGC GATCCGAAGC TGATTCCCGA AGAGCTGATC
AAGCTGGTCA CCGACGTGCG CCGCGCCGGC GTGGACGAGC TGGCCGGCAA CATCGTGCTG
GACCGCTCCT ATTTCGAGAA CGGCCTGTCC GACGCGCCGC CGCTGGACGG CGACACCGGC
CGCGCCTACA ACGTCGCGCC CGATGCGCTG CTCTACGCGT TCAAGACGCT GACCTTCACG
CTCGCGCCCG ACGCCGCCAC CGGCGCGGTC AACGTCGACG TGTCGCCGCC GCTGGCCCAG
CTGCAGGTCG ACAACCAACT GCACGTGACG CACGGCAACT GCGGCGACTG GCGCTCGCAT
GCCAATTTCG ACATCGCCAC GCAGGCCGAC GGCACGGTGC GCGCCAGCTT CGACGGGCGC
TACGCCGGCG CCTGCGGCGA GCGCATCTTC AATGTCGCCG CGCTCACCCA CGCCGACTTC
ATCTGGGGCG GCTTCCTGGC GCTGTGGCGG CAGGCAGGCG GCACCTTCCG CGCCACGCCG
GGCCTGCGCG AGGGCAAGGT GCCGCATCCG GCCGTCCTGC TGGCGACGCA CTACGGCCCG
ACCCTCGCCG AGGTCGTGCA CGACATCGAC AAGTATTCGA ACAACGTGAT GGCGCGCCAG
CTGTTCCTGA CCATCGGCGC CGAGATCGGC CGCAAGCCCG CGTCGGTGCA GCAATCGGCG
GACATCATCA GCCGCTGGCT CGCCCGGCAG AACCTGTCCA TGCCGGAGCT GGTGCTGGAG
AACGGCTCGG GCCTCTCGCG CATCGAGCGC ATCAGCGCCC GCAACCTGGG CCGCCTGCTG
CAGCAGGCCG ATGCCAACCC CAACGGCGCC ATCCTGCGCG ACGCGCTGCC GGTGGTGGGC
GTGGACGGCA CCATGCGCAA CCGCCTCACG CGCGCGGGCG TGGCCGGCAA CGCCGAGATC
AAGACCGGCA CGCTCAACGA CGTGCGCGCC ATCGCCGGCT ACGTGGAAGG CGAAGGCGGC
CAGCGCTACG TGGTGGTCAG CATGATCAAC CACCCCAGCG CCGGCGGCGG CCAGGCCGCA
CACGACGCCC TGCTGCAATG GATCTACCAG GGGGCGCCGC AATGA
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| Protein sequence | MARIIRLTRL LRLSRCAVAC AALLAFTAAP LAQARKPARA HAAPAATVAQ KRQAAHNPAG
LPANVALAFA RAHIPLDAVS VFVIRTGTAT PILQWNADAG MNPASTMKLL TTFAGLDLLG
PDFRWKTSAY ADRPPAGGVL SGNLYLRGQG DPKLIPEELI KLVTDVRRAG VDELAGNIVL
DRSYFENGLS DAPPLDGDTG RAYNVAPDAL LYAFKTLTFT LAPDAATGAV NVDVSPPLAQ
LQVDNQLHVT HGNCGDWRSH ANFDIATQAD GTVRASFDGR YAGACGERIF NVAALTHADF
IWGGFLALWR QAGGTFRATP GLREGKVPHP AVLLATHYGP TLAEVVHDID KYSNNVMARQ
LFLTIGAEIG RKPASVQQSA DIISRWLARQ NLSMPELVLE NGSGLSRIER ISARNLGRLL
QQADANPNGA ILRDALPVVG VDGTMRNRLT RAGVAGNAEI KTGTLNDVRA IAGYVEGEGG
QRYVVVSMIN HPSAGGGQAA HDALLQWIYQ GAPQ
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