Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0577 |
Symbol | |
ID | 1219382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 621121 |
End bp | 622131 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637236936 |
Product | hypothetical protein |
Protein accession | NP_518698 |
Protein GI | 17545296 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAGT CGACCACGCC CTTCGTCATG CCTCCCGCCG CGCGCCTCGA TGAGGCCGCG CGCCGGCTGG AAGCGGGCGA GCTGGTCGCC TTCCCGACCG AGACCGTCTA CGGCCTCGGC GCCGATGCCG AGAACCCTCA GGCCATTGCC CGGATCTACG CGCTGAAGGG CCGGCCGTCG AACCATCCGG TGATCGTGCA CGTGGTCGAC GGCGCGGACC TGACGTACTG GGCCGACGAC GTGCCCGGCA TCGCGCTGCA GCTGGTCGAG GCGTTCTGGC CGGGCCCGCT CACGCTGATC CTCAAGCGCG CGCCGCACAT CCCGGCGGCG GTCGCGGGCG GGCAGGACAG CGTCGGATTG CGCTGTCCGT CGCATCCGGT GGCGCAGGCG CTGCTGTCGC GCTTCAAGCG CGGTCGCGGC GGCATCGCGG CGCCGTCGGC CAACAAGTTT GGCCAGGTCA GCCCGACCAC CGCGCAGCAT GTGCGCGACG AGTTCGGCGA TGCCGTGTTC GTGCTCGAAG GTGATGGGGT GGATGTCGGC ATCGAGTCCA CCATCGTCGA CCTGTCGCGG CTGGACCAGG GCGTCGGGCC GGTGCTGCTG CGCCCCGGCG CCATCACGCC GGAGGACATC GGGCGCGTGA CCGGCGTGAT GCCGTTGCTG CCCGATGCCG CCGCGCCGCG CGCGTCCGGA ACGCTGCGCG CGCATTACGC GCCGCGCACG CCGCTGTATC TGCTGGCCGC TGCCGATGTG CCCGCGCGGC TGGCCGCGCT GCCGGCCGGT CGGCGCATCG TGTGGGTGGG GGCGCCTGTC GACCTGCCGC CCGGCTGCGA CCAGCATGCC GCACCCGCCA CGCCGGCGGC CTACGCCAAT GCGCTGTACG CCTTGCTGCG CGAACTGGAT CGCGGCGGCT ATCACGCCAT CTGGGTGGAA ACCCTGCCTG ACACCTCCGC CTGGGCGGCG GTCAACGACC GCCTGCGTCG CGCTGCCGCC GCGTTCGAAG CCGGCCTCTA A
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Protein sequence | MHKSTTPFVM PPAARLDEAA RRLEAGELVA FPTETVYGLG ADAENPQAIA RIYALKGRPS NHPVIVHVVD GADLTYWADD VPGIALQLVE AFWPGPLTLI LKRAPHIPAA VAGGQDSVGL RCPSHPVAQA LLSRFKRGRG GIAAPSANKF GQVSPTTAQH VRDEFGDAVF VLEGDGVDVG IESTIVDLSR LDQGVGPVLL RPGAITPEDI GRVTGVMPLL PDAAAPRASG TLRAHYAPRT PLYLLAAADV PARLAALPAG RRIVWVGAPV DLPPGCDQHA APATPAAYAN ALYALLRELD RGGYHAIWVE TLPDTSAWAA VNDRLRRAAA AFEAGL
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