Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0571 |
Symbol | pgk |
ID | 1219376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 614382 |
End bp | 615641 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637236930 |
Product | phosphoglycerate kinase |
Protein accession | NP_518692 |
Protein GI | 17545290 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATCGG GTAAAATCGC CGCTTTCCGT GATTTCTCCG CTGCTGCCAT GCCCAACGTC CTGCGTCTGA CCGATCTCAT CTCCGAAGGC AAGCTTGCCG GCAAGCGTGT CTTCATCCGC GCCGATCTCA ACGTGCCGCA AGACGATGCC GGCAACATCA CCGAAGACAC GCGCATCCGC GCTTCGGTGC CGGCCATCCG CGCCGCGCTC GACGCCGGTG CCGCCGTGAT GGTCACCTCG CATCTGGGCC GTCCGACCGA AGGCGAGTTC AAGCCGGAAG ATTCGCTGGC CCCGGTGGCC GTGCGCCTGT CCGAGTTGCT CGGCTGTGAG GTGAAGCTGG TGCAGAACTG GGTCGACGGC GTGGATGTCG CGCCCGGCCA GGTGGTGCTG CTGGAAAACT GCCGCGTCAA CAAGGGCGAG AAGAAGAACA GCGACGAACT GGCCCAGAAG ATGGCCAAGC TGTGCGACGT CTACGTCAAC GACGCCTTCG GCACCGCCCA CCGCGCCGAG GCCACCACGC ACGGCATCGC CAAGTTTGCC CCCATCGCCT GCGCCGGCCC GCTGCTGGGC GCCGAGCTGG ACGCGCTGGG CAAGGCGCTG GGCCAACCGG CCCGTCCGCT GGTCGCCATC GTGGCCGGCT CCAAGGTGTC GACCAAGCTG ACCATCCTGA AATCGCTGGC CGACAAGGTG GACAACCTGA TCGTCGGCGG CGGCATCGCC AACACGTTCA TGCTGGCCGC GGGCCTGAAG ATCGGCAAGT CGCTGGCCGA GGCGGATCTG GTGGGCGATG CCAAGGCGAT CATCGACCTG ATGGCTGCCC GTGGCGCCTC GGTGCCCATT CCTGTCGATG TGGTCTGCGC CAAGGAATTC AGCGCCACCG CTGCCGCCAC CGTCAAGGAC GTGAAGGACG TGGCGGATGA CGACATGATT CTCGACATCG GCCCGAAGAC CGCCGCGCAA CTGGCCGACC AGCTCAAGGC CTCCGGCACC ATCGTGTGGA ACGGCCCGGT CGGCGTGTTC GAGTTCGACC AGTTCGGCAA CGGCACCAAG GTGCTGGCCG AGGCGATCGC GGCCTCGTCG GGCTTCTCGA TCGCCGGTGG CGGCGATACG CTGGCGGCGA TCGCCAAGTA CGGCATCGCC GACCGCGTGG GCTACATCTC CACCGGCGGC GGCGCATTCC TGGAATTCCT GGAAGGCAAG ACGCTGCCGG CCGTGGAGAT CCTGGAGCAG CGTGCCCAGC GCCAGGAAGC GCTGGCCTGA
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Protein sequence | MASGKIAAFR DFSAAAMPNV LRLTDLISEG KLAGKRVFIR ADLNVPQDDA GNITEDTRIR ASVPAIRAAL DAGAAVMVTS HLGRPTEGEF KPEDSLAPVA VRLSELLGCE VKLVQNWVDG VDVAPGQVVL LENCRVNKGE KKNSDELAQK MAKLCDVYVN DAFGTAHRAE ATTHGIAKFA PIACAGPLLG AELDALGKAL GQPARPLVAI VAGSKVSTKL TILKSLADKV DNLIVGGGIA NTFMLAAGLK IGKSLAEADL VGDAKAIIDL MAARGASVPI PVDVVCAKEF SATAAATVKD VKDVADDDMI LDIGPKTAAQ LADQLKASGT IVWNGPVGVF EFDQFGNGTK VLAEAIAASS GFSIAGGGDT LAAIAKYGIA DRVGYISTGG GAFLEFLEGK TLPAVEILEQ RAQRQEALA
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