Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0568 |
Symbol | |
ID | 1219373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 612283 |
End bp | 613080 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637236927 |
Product | hypothetical protein |
Protein accession | NP_518689 |
Protein GI | 17545287 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTAG CCCGCTGGGG CGCGGCGCTG CAGCGCCGGT GGCAGGCCAT CGACCCGGCC GAGCGCGCCG GCTTTGTCGC CGGTGCCCGC TTCTATGTCG GCTCGCTGCC GCCGGTGTTT GCCTGGGGAC TGGTGACCGG CGTGGCGATG AGCAAGTCGG TCCTGACCAT CCCGCAGGCG ATCGGCATGA CGCTGCTGGT CTATGCCGGT TCGTCGCAAC TGGCCGTGTT GCCGCTGATG GCCGCCGGCC TGCCGGTCTG GACTGTGCTG TTGACGGCGT TCATCGTCAA CGTGCGCTTC ATCATCTTCA GCGCGGGGCT GATGCAGCAT TTCAGCCATC TGCCCTTCGG GCGGCGGGTC CTGATCGGTT TCTTCAATGG CGATCTGCCG TTCGTGCTGT TCTCGCAGCG CTACCCGGGG CCGGGCCCGG AGCGCGGCAA GGAAGGCTAT CTCTGGGGCA TGGCGCTGGC CAACTGGACG ATCTGGCAGG TGTCGTCTCT CCTGGGCATC GTCGGCGCGA GCCTGTTCCC GGATGCATGG GGCCTGGCGC TGGCGGGCAC GCTGGCGCTG ATTCCGGTGA TGGTGTCGAC CATCCGCTCG CGCGCCACGC TGATGGCCGT GGCGGTCGCC GCGGTGCTGG CGCTGGTCGC CTTCAAGCTG CCGTACCGGC TGAGCCTGGT GATCGCCGTG GTGGGCGCGA TGGCGGCCGG CCTGGCCGGC GACGAAGCCA CCGCTCGCCT GCAATGGCAG CGCCGCGGCG CGCAGCCGGC GCCGTCCGAG CCGAAGGAGG GGCCGTGA
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Protein sequence | MALARWGAAL QRRWQAIDPA ERAGFVAGAR FYVGSLPPVF AWGLVTGVAM SKSVLTIPQA IGMTLLVYAG SSQLAVLPLM AAGLPVWTVL LTAFIVNVRF IIFSAGLMQH FSHLPFGRRV LIGFFNGDLP FVLFSQRYPG PGPERGKEGY LWGMALANWT IWQVSSLLGI VGASLFPDAW GLALAGTLAL IPVMVSTIRS RATLMAVAVA AVLALVAFKL PYRLSLVIAV VGAMAAGLAG DEATARLQWQ RRGAQPAPSE PKEGP
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