| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0565 |
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| Symbol | rfaF |
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| ID | 1219370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 609776 |
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| End bp | 610801 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236924 |
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| Product | ADP-heptose--lipopolysaccharide heptosyltransferase II protein |
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| Protein accession | NP_518686 |
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| Protein GI | 17545284 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.995222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA AGATCCTGGT CGTCGCCCCC AACTGGATCG GCGACGCGCT GATGGCGCAG
CCGCTGTTCG CGCAGATCAA GGCGCGGCAT CCGCGCGCGC AGATCCATGC CATCGCCCCG
AAGTGGGTGG CGCCGGTGCT CGCGCGCATG CCCGAGATCA CGCGCGTGCT GCCGACTGAA
CTGGCGCACG GCAAGCTGCA GCTCGGCAGC CGCACGATGT TCGCCCAGCA GCTCAAGGGG
GAATCGTTCG ATGCCGCCTA TGTGCTGCCG AACTCGTTCA AGAGCGCGCT GATCCCGTGG
CTGGCCGGCA TTCCGCTGCG CATCGGCTAC AAGGGCGAAT CGCGGCTGGG CGTGCTCAAC
GTGCGCTACC CGAACCCGCC CAAGCGCGAA CGGCCGCCGA TGGTGCAGCA CTATGCGGCG
CTGGCCTTCA AGCCCGGCGC CAAGCTGCCC GAGACCCTGC CCGACCCGCA GCTGCGGGTG
GACCTGCCGC GCGTGGCCGC CACCTCGGCC AAGTTCGGCA TTCCCGGCAA CGCCCGGCTG
ATCGCCTTCT GCCCGGGCGC GGAATACGGC ACCGCCAAGC GCTGGCCCGC CGAGCACTTC
GCCGAGCTGG CGCAGATGCT GCGGCGCTCG TTCCCGTACG CGCACATCGT CACGCTCGGC
TCGGCCAAGG ATCGCGAGAC CGCCGACGCC ATCGCCGAGC GCGCGCCTTT CGTGCGCAAC
CTGTGCGGCG AGACCTCGCT GGACGAGGCC ATCGAGCTGC TCGCCCGCGC CGAGGCCGCC
ATCTGCAACG ACTCGGGCCT GATGCACGTC ACGGCTGCCC TGGGGCGCCC GCAGGTGGCC
GTGTTCGGCT CGAGCGACCC GCGCCACACG CCGCCGCTGT CACCCGCTGC GAGTATCATG
TGGCTCCATC TCGAATGCAG CCCGTGCTTC GCCCGCGAAT GCCCGCTCGG CCATCTGCGC
TGCCTGCGCG ACATCGGTCC CGAGATGGTG TTTCATGAAT TGCGCCGGCT GCTGCAGCCG
GTGTAA
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| Protein sequence | MMRKILVVAP NWIGDALMAQ PLFAQIKARH PRAQIHAIAP KWVAPVLARM PEITRVLPTE
LAHGKLQLGS RTMFAQQLKG ESFDAAYVLP NSFKSALIPW LAGIPLRIGY KGESRLGVLN
VRYPNPPKRE RPPMVQHYAA LAFKPGAKLP ETLPDPQLRV DLPRVAATSA KFGIPGNARL
IAFCPGAEYG TAKRWPAEHF AELAQMLRRS FPYAHIVTLG SAKDRETADA IAERAPFVRN
LCGETSLDEA IELLARAEAA ICNDSGLMHV TAALGRPQVA VFGSSDPRHT PPLSPAASIM
WLHLECSPCF ARECPLGHLR CLRDIGPEMV FHELRRLLQP V
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