Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0563 |
Symbol | |
ID | 1219368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 608139 |
End bp | 609254 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236922 |
Product | hypothetical protein |
Protein accession | NP_518684 |
Protein GI | 17545282 |
COG category | [R] General function prediction only |
COG ID | [COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCC CGTTCCGCTC CGCCGCTCCC GCCGACCTCA ACCTGGGCGC GCTGCTCATC GGCCCGTTCG AGCCGCACGC GTTCCGCTCG CCCTGGTGGC TGATCGGCGG CAACGCGCAG ACCATCGTCC CGGCGCGGCT GTGGCGCTTC CCGCGCATCG CGTACCGGCG CGAGCGCTGG GACACGCCCG ACGGCGACTT CATCGATCTC GACTGGACCA CGCACGAAGC CGATGCGCAC ACGCCGCTGG TGGTACTGTT CCACGGCCTG GAAGGCGACT CGCGCAGCCA CTACGCCCAA TTGATGATGG ATGCGCTGCG CGCGCGCCGC TGGCCCGGCG TGGTGCCGCA TTTCCGCGGC TGCTCGGGCG AACTGAACCG CGCGCCGCGC ATGTACCACT CCGGCGACTC GGCCGAGATC GCGTGGATCC TCGACCGGCT CTACCGGACG CACTGCGCGC CGCACGGCCG CAAGCTGCTG GCGGTGGGCA TCTCGCTGGG CGGCAACATG CTGCTGCGCC ACCTGGGCGA GCGCGGCGCC GATGCGCGCC AGCTGAGCGC CGCCGCCACC GTCTCCGCCC CGCTGGACAT GATGGCGGGC GGCGCGGCGC TGTCCCAGGG CTTCGGCATG CTCTACACCC GCATGTTCCT GCGCACGCTC AAGCAGAAGG CCGCGGCCAA GCTCGACCAG CATCCCGGCC TGTACGACCG CCACGCCATG CTGGCCGCGC GCAGCTTCGT CGAATTCGAC AACCTCGTCA CCGCGCCGCT GCACGGCTAC CGCAACGTCT ACGACTATTG GACGCGCGCC TCGTCCAAGC CGGTACTGCG CGATGTGCGC GTGCCGGTGC TGGTGCTGAA CGCGCGCAAC GATCCCTTCC TGCCCGGACG CCACCTGCCC GGCCCCGGCG ACGTCTCGCC CGACGTGGTG CTCGACCAGC CGCTGCACGG CGGCCACGTC GGCTTCCTGA TGCGGCGCGA CGGCAAGCTG CGCCATCTCC CGCTGGCCGG CCGCATCGAC TGGATGCCGG CGCGCCTGCT GCGCTTCTTC GACGACGTGC TCGGCCGCAC GCCCCGCCCG GATGCCCCCG AACACCCCGG AGCCGACCGT GGATGA
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Protein sequence | MIRPFRSAAP ADLNLGALLI GPFEPHAFRS PWWLIGGNAQ TIVPARLWRF PRIAYRRERW DTPDGDFIDL DWTTHEADAH TPLVVLFHGL EGDSRSHYAQ LMMDALRARR WPGVVPHFRG CSGELNRAPR MYHSGDSAEI AWILDRLYRT HCAPHGRKLL AVGISLGGNM LLRHLGERGA DARQLSAAAT VSAPLDMMAG GAALSQGFGM LYTRMFLRTL KQKAAAKLDQ HPGLYDRHAM LAARSFVEFD NLVTAPLHGY RNVYDYWTRA SSKPVLRDVR VPVLVLNARN DPFLPGRHLP GPGDVSPDVV LDQPLHGGHV GFLMRRDGKL RHLPLAGRID WMPARLLRFF DDVLGRTPRP DAPEHPGADR G
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